DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68beta and elo-1

DIOPT Version :9

Sequence 1:NP_001097580.1 Gene:Elo68beta / 39245 FlyBaseID:FBgn0036128 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_501689.1 Gene:elo-1 / 177787 WormBaseID:WBGene00001239 Length:288 Species:Caenorhabditis elegans


Alignment Length:242 Identity:72/242 - (29%)
Similarity:108/242 - (44%) Gaps:27/242 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LYLLMVRYAPKWTARCK-PLQLRVPL--FCHSLAMIFLNGYICL--EFLTASLSLGYNFACQECR 103
            ||:::| :..||..|.: |.||.:||  :...||...:.|.:.:  ||.....:.|  .....|:
 Worm    53 LYMVVV-FGTKWFMRNRQPFQLTIPLNIWNFILAAFSIAGAVKMTPEFFGTIANKG--IVASYCK 114

  Fly   104 VSHDPHEIRIAAAMWWFYISKILEFVDTAFFILRHKWNQLSFLHVYHHSTMFLFCWTYVKWLPTG 168
            | .|..:......:|.|..||:.|.|||.|.:||.:  .|.|||.|||....::.| |...|..|
 Worm   115 V-FDFTKGENGYWVWLFMASKLFELVDTIFLVLRKR--PLMFLHWYHHILTMIYAW-YSHPLTPG 175

  Fly   169 STFFPSMINSFVHVIMYSYYALSVLGPRVQRFLWWKRYLTGLQLVQFTIIFFWASQLVF------ 227
            ...:...:|..||..|||||.|..:..||..|:  .:.:|.||:|||.|.....:.|.:      
 Worm   176 FNRYGIYLNFVVHAFMYSYYFLRSMKIRVPGFI--AQAITSLQIVQFIISCAVLAHLGYLMHFTN 238

  Fly   228 RGCEYGKWLTPIGAAYMVPFLFMFGRFYAQKYCV-------SAVVKK 267
            ..|::...:..:.......:|.:|..|:.|.|.:       .||.||
 Worm   239 ANCDFEPSVFKLAVFMDTTYLALFVNFFLQSYVLRGGKDKYKAVPKK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68betaNP_001097580.1 ELO 48..267 CDD:279492 68/236 (29%)
elo-1NP_501689.1 ELO 39..278 CDD:279492 68/233 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R389
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

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