DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elo68beta and sit

DIOPT Version :10

Sequence 1:NP_001097580.1 Gene:Elo68beta / 39245 FlyBaseID:FBgn0036128 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_061514427.1 Gene:sit / 1275641 VectorBaseID:AGAMI1_005433 Length:294 Species:Anopheles gambiae


Alignment Length:258 Identity:91/258 - (35%)
Similarity:152/258 - (58%) Gaps:1/258 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SSMGNDTKTESYSYPFADLADERTQDWPLVKSPWNIIALLALYLLMV-RYAPKWTARCKPLQLRV 66
            :|....|.:..:.:.|.:|||.||..|||:.||...:.::|.||..| .:.||:.|..||.|::.
Mosquito     2 ASTNATTSSNYWDFLFTELADPRTNHWPLISSPVPGLTIIASYLYFVLNFGPKYMANRKPFQMQK 66

  Fly    67 PLFCHSLAMIFLNGYICLEFLTASLSLGYNFACQECRVSHDPHEIRIAAAMWWFYISKILEFVDT 131
            .|..::...:.::.|:..|.|..:....|::.||....:.:|..:|:|...:.::::||.|.:||
Mosquito    67 TLVVYNFIQVLVSIYLFAEGLDGAWLRHYSWRCQPVDFNDNPAAMRVARGCYIYFLAKISELLDT 131

  Fly   132 AFFILRHKWNQLSFLHVYHHSTMFLFCWTYVKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPR 196
            .||.||.|.||::|||:|||:.|.:..|...|:.|.|...|..:||||||::||:||.::.:||:
Mosquito   132 VFFTLRKKDNQITFLHLYHHTVMPMISWGATKYYPGGHGTFIGVINSFVHIVMYTYYMMAAMGPQ 196

  Fly   197 VQRFLWWKRYLTGLQLVQFTIIFFWASQLVFRGCEYGKWLTPIGAAYMVPFLFMFGRFYAQKY 259
            .|::||||:|:|.||::||.:.|..::||::..|.|.:|.........:.|..:|..||.:.|
Mosquito   197 YQKYLWWKKYITNLQMIQFGMAFAHSAQLLWTDCGYPRWSVFFTLPNAIFFYMLFNDFYKKSY 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68betaNP_001097580.1 ELO 48..267 CDD:460083 75/213 (35%)
sitXP_061514427.1 None

Return to query results.
Submit another query.