DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and TCD1

DIOPT Version :10

Sequence 1:NP_648435.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_011866.1 Gene:TCD1 / 856392 SGDID:S000001045 Length:429 Species:Saccharomyces cerevisiae


Alignment Length:438 Identity:86/438 - (19%)
Similarity:150/438 - (34%) Gaps:123/438 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSPAPKSPELSDKSKKYD---------RQIRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVL 56
            :|..|.|:..:| :.::||         |.....||.|...::...:.:|....||......|:.
Yeast    32 LSCAANKNKTVS-RPRQYDDHLFREQLARNYAFLGEEGMRKIKEQYIVIVGAGEVGSWVCTMLIR 95

  Fly    57 PGIGGFTVADGSTVKEEDLGNNFFLDSSYLGKSKALACMQLLQELNP------DVNGDYVDESAD 115
            .|.....:.|...:..:.|..:.....|.:||.|.....:.|.::.|      .......:.|.|
Yeast    96 SGCQKIMIIDPENISIDSLNTHCCAVLSDIGKPKVQCLKEHLSKIAPWSEIKARAKAWTKENSHD 160

  Fly   116 FLLAN--RPNFF-DSFDLVIASNLNEQTLLLLAERLWELNVPLIYCRSLGML---GTIRLQIREH 174
            .:.|:  .|.|. |..|     ||..:..||  |......:.:|  .|:|:.   ...|:.|.:.
Yeast   161 LIFADGESPTFIVDCLD-----NLESKVDLL--EYAHHNKIDVI--SSMGVATKSDPTRVSINDI 216

  Fly   175 CIVEAHP----------------------DNRQFDLRLE---HPFD------------ALREHLD 202
            .:.|..|                      .|...|.|.:   .|.|            ||| ||.
Yeast   217 SMTEFDPISRCVRRKLRKRGIATGISVVFSNEMLDPRRDDILSPIDCEHRAINAVRDEALR-HLP 280

  Fly   203 --GTEVTSKVPWLLVLHKYLNVWQKQQADGTQTPRNYKEKNQLK------ETIREEMKADEENYE 259
              ||     :|.:..|.  :..|...:..|.....| :.||:||      ||.:::|....||.|
Yeast   281 ELGT-----MPGIFGLS--IATWILTKVSGYPMKEN-EVKNRLKFYDSILETFQKQMARLNENKE 337

  Fly   260 EAIKAVNTAFGAGQVPKSLKAIFEDDA------------CEQLNKKSNVFWIMAKALKHFVIHEN 312
            .     ::..|..:|...::.:|...:            ..:.||:.::..::....:...|||.
Yeast   338 R-----SSLLGLEEVGYIVEEMFRGKSPISGYSTKLALTKWEANKEISLTNVVLMTKEEQEIHEK 397

  Fly   313 EGHLPLPGVLPD---MTANTDSYIALQHIYRQQALQDADQVYHKCQEY 357
            .       :|.|   :||          :|.::.|...:::: |.:||
Yeast   398 R-------ILLDGEKLTA----------VYSEEVLDFIERLF-KEEEY 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_648435.1 APPBP1_RUB 16..522 CDD:238770 82/423 (19%)
TCD1NP_011866.1 YgdL_like 64..298 CDD:238384 50/250 (20%)

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