DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and TCD1

DIOPT Version :9

Sequence 1:NP_001261699.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_011866.1 Gene:TCD1 / 856392 SGDID:S000001045 Length:429 Species:Saccharomyces cerevisiae


Alignment Length:437 Identity:85/437 - (19%)
Similarity:151/437 - (34%) Gaps:121/437 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSPAPKSPELSDKSKKYD---------RQIRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVL 56
            :|..|.|:..:| :.::||         |.....||.|...::...:.:|....||......|:.
Yeast    32 LSCAANKNKTVS-RPRQYDDHLFREQLARNYAFLGEEGMRKIKEQYIVIVGAGEVGSWVCTMLIR 95

  Fly    57 PGIGGFTVADGSTVKEEDLGNNFFLDSSYLGKSKALACMQLLQELNP------DVNGDYVDESAD 115
            .|.....:.|...:..:.|..:.....|.:||.|.....:.|.::.|      .......:.|.|
Yeast    96 SGCQKIMIIDPENISIDSLNTHCCAVLSDIGKPKVQCLKEHLSKIAPWSEIKARAKAWTKENSHD 160

  Fly   116 FLLAN--RPNFF-DSFDLVIASNLNEQTLLLLAERLWELNVPLIYCRSLGML---GTIRLQIREH 174
            .:.|:  .|.|. |..|     ||..:..||  |......:.:|  .|:|:.   ...|:.|.:.
Yeast   161 LIFADGESPTFIVDCLD-----NLESKVDLL--EYAHHNKIDVI--SSMGVATKSDPTRVSINDI 216

  Fly   175 CIVEAHP----------------------DNRQFDLR---------LEH-PFDALRE----HLD- 202
            .:.|..|                      .|...|.|         .|| ..:|:|:    ||. 
Yeast   217 SMTEFDPISRCVRRKLRKRGIATGISVVFSNEMLDPRRDDILSPIDCEHRAINAVRDEALRHLPE 281

  Fly   203 -GTEVTSKVPWLLVLHKYLNVWQKQQADGTQTPRNYKEKNQLK------ETIREEMKADEENYEE 260
             ||     :|.:..|.  :..|...:..|.....| :.||:||      ||.:::|....||.|.
Yeast   282 LGT-----MPGIFGLS--IATWILTKVSGYPMKEN-EVKNRLKFYDSILETFQKQMARLNENKER 338

  Fly   261 AIKAVNTAFGAGQVPKSLKAIFEDDA------------CEQLNKKSNVFWIMAKALKHFVIHENE 313
                 ::..|..:|...::.:|...:            ..:.||:.::..::....:...|||..
Yeast   339 -----SSLLGLEEVGYIVEEMFRGKSPISGYSTKLALTKWEANKEISLTNVVLMTKEEQEIHEKR 398

  Fly   314 GHLPLPGVLPD---MTANTDSYIALQHIYRQQALQDADQVYHKCQEY 357
                   :|.|   :||          :|.::.|...:::: |.:||
Yeast   399 -------ILLDGEKLTA----------VYSEEVLDFIERLF-KEEEY 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_001261699.1 APPBP1_RUB 16..522 CDD:238770 81/422 (19%)
ThiF 17..>171 CDD:223552 35/174 (20%)
TCD1NP_011866.1 TcdA 50..309 CDD:224100 51/274 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343295
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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