DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment APP-BP1 and ULA1

DIOPT Version :9

Sequence 1:NP_001261699.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_015322.1 Gene:ULA1 / 856104 SGDID:S000005924 Length:462 Species:Saccharomyces cerevisiae


Alignment Length:552 Identity:138/552 - (25%)
Similarity:230/552 - (41%) Gaps:134/552 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KKYDRQIRLWGEHGQTLLEAATVCLVN-VTAVGCETAKGLVLPGIGGFTVADGSTVKEEDLGNNF 79
            ::||||:||||..||..|..:.||:|. .|.:..|..|.|||.||...|                
Yeast     2 ERYDRQLRLWGALGQDSLNRSRVCVVGPATPLLQEVFKNLVLAGISSLT---------------- 50

  Fly    80 FLDSSYLGKSKALACMQLLQELNPDVNGDYVDESADF-LLANRPNF-FDSFDLVIASNLNEQTLL 142
            :|......:|.:|...:|.::|.|..:.....|..|. ....:|.: :..|.:||.:.:.|||.:
Yeast    51 WLKVECAVQSGSLFLAELKKDLEPLASKQLEYEENDLRKTLQQPQYDWTRFSVVILTCIGEQTAM 115

  Fly   143 LLAERLWELN----------VPLIYCRSLGMLGTIRLQIRE-HCIVEAHPDNRQFDLRLEHPFDA 196
            |      :||          .|::.....|..|.|.|.:.| |.:::||||::::||||::|:..
Yeast   116 L------DLNEIRRQRGTKFPPVLNTFVSGFYGYIYLVLSETHFVLQAHPDSKKYDLRLQNPWPE 174

  Fly   197 LREHLD-------GTEVTSKVPWLLVLHKYLNVWQKQQADGTQTPRNYKEKNQLKETIREEMKAD 254
            |..::|       .|...|.:|:.::|.|.:   .|.:.||........:..::.:.|...:..|
Yeast   175 LINYVDTFDLSKMDTATFSGIPYTVLLMKCI---AKLERDGNNGRITIDQMKKVLDQICLPLGND 236

  Fly   255 ---EENYEEAIKAVNTAFGAGQVPKSLKAIFEDDACEQL-----NKKSNVF---W-------IMA 301
               |.||.||.:            .:..|..::|.|::|     |.:.:.:   |       |:.
Yeast   237 VIYEPNYVEAKR------------YAYLACSQNDCCKELEDLLRNLEISDYGNDWHDTYNYEILT 289

  Fly   302 KALKHFVIHENEGHL---PLPGVLPDMTANTDSYIALQHIYRQQALQDADQVYHKCQEYLKQLAL 363
            ..|....|.:..|.|   ||.|.||||.:.|::||.|:.:|..:|..|..:|    :|.|     
Yeast   290 LLLTLKNIAKENGELSFQPLTGTLPDMESTTENYIRLKKLYEVKAKLDKSRV----EESL----- 345

  Fly   364 PADSIDERSVRLICKEAAGLAVIRGTRIAEEYEKSSRLLPLVEDNELQGNLTAYNFALRAYERFL 428
                  .||.:::.::..       ......|.:..::||  ..::|.|..:..|..|       
Yeast   346 ------ARSKKIVSQDVL-------ETFCSHYGEVRKILP--PKSDLLGIFSTSNALL------- 388

  Fly   429 SECGNIPGECIVEQDIGRLKSIAAKMLSD-LGMHATISDDVLHEICRYGGAELHAVSAFIGGCAA 492
                    :.:|........::.|:...: :|:.  :.|:             ::|.||.||...
Yeast   389 --------DALVMVQFWEQPAVTAEDKDEFIGLR--VDDN-------------YSVMAFFGGAVV 430

  Fly   493 QEVIKIITKQYKPIDNTFIYNAITTESVTLKL 524
            ||.||:||..|.||||.|:||.|...|.|.|:
Yeast   431 QEAIKLITHHYVPIDNLFLYNGINNSSATYKI 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_001261699.1 APPBP1_RUB 16..522 CDD:238770 136/548 (25%)
ThiF 17..>171 CDD:223552 46/166 (28%)
ULA1NP_015322.1 E1_enzyme_family 2..460 CDD:304554 136/548 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2092
OMA 1 1.010 - - QHG54417
OrthoFinder 1 1.000 - - FOG0003676
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101722
Panther 1 1.100 - - LDO PTHR10953
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1600
SonicParanoid 1 1.000 - - X3040
TreeFam 1 0.960 - -
1110.760

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