DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and TCD2

DIOPT Version :10

Sequence 1:NP_648435.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_012898.1 Gene:TCD2 / 853841 SGDID:S000001510 Length:447 Species:Saccharomyces cerevisiae


Alignment Length:399 Identity:68/399 - (17%)
Similarity:120/399 - (30%) Gaps:139/399 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SDKSKKYDRQ---------IRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADG 67
            :||..:||.|         :...||.....|....|.:|....||......||..|.....|.| 
Yeast    54 TDKYHQYDEQFIRQSLKNNVEFLGEDTIEKLSNQYVVVVGAGGVGSWVVNSLVRSGCRKIRVVD- 117

  Fly    68 STVKEEDLGNNFFLDSSYLGKSKALACMQLLQELNPDVNGDYVDESADFLLANRPNFFDSFDLVI 132
                                                                        ||.|.
Yeast   118 ------------------------------------------------------------FDQVS 122

  Fly   133 ASNLNEQTLLLLAERLWELNVPLIYCRSLGMLGTIRLQIRE---HCIVEAHPDNRQFDLRLEHPF 194
            .|:||..:..:|.    ::..|.:.|        :|..:||   .|  |..|.|..:.|:.....
Yeast   123 LSSLNRHSCAILN----DVGTPKVEC--------LRRHMREIAPWC--EIDPINELWTLQNGERL 173

  Fly   195 -------DALREHLDGTEVTSKVPWLLVLHKY-LNVWQKQQADGTQTPRNYK-------EKNQLK 244
                   |.:.:.:|  .:.:||..|...:.: :.|.....|.....|....       |::.|.
Yeast   174 TLGNGTPDFIVDCID--NIDTKVDLLEFAYNHGIKVISSMGASAKSDPTKLNVGDLATTEEDPLA 236

  Fly   245 ETIREEMKADEENYEEAIKAVNTAFGAGQV-PKSLKAI------FEDDACEQLNKKSNVFWIMAK 302
            ..:|.::|.     ...:..:...|.|.:. ||..|.:      :|....::|:           
Yeast   237 RVVRRKLKK-----RGILSGIPVVFSAEKPDPKKAKLLPLPDEEYERGKVDELS----------- 285

  Fly   303 ALKHFVIHENEGHLPLPGVLPDMTANT-DSYI-------ALQHIYRQQALQDADQVYHKCQEYLK 359
            |||.|.:.    .||:.|.:|.:...| .::|       .|:.:..:..::..|.:|......:.
Yeast   286 ALKDFRVR----ILPVLGTMPSLFGLTITTWILSNISDKPLEPVEGKNRIKVYDGIYQSLAGQMS 346

  Fly   360 QLALPADSI 368
            ::.:|:..|
Yeast   347 RVGIPSQRI 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_648435.1 APPBP1_RUB 16..522 CDD:238770 66/395 (17%)
TCD2NP_012898.1 YgdL_like 76..314 CDD:238384 57/334 (17%)

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