DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and CNX5

DIOPT Version :10

Sequence 1:NP_648435.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_200324.1 Gene:CNX5 / 835604 AraportID:AT5G55130 Length:464 Species:Arabidopsis thaliana


Alignment Length:193 Identity:43/193 - (22%)
Similarity:82/193 - (42%) Gaps:28/193 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SPELS-----DKSKKYDRQIRL--WGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVA 65
            :|||.     |:..:|.||:.|  :...||:.|..::|.::....:|......|...|:|...:.
plant    57 APELEHGLSPDQIYRYSRQLLLPSFAVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGQLGII 121

  Fly    66 DGSTVKEEDLGNNFFLDSSYLG----KSKALACMQLLQELNPDVNGDYVDESADFL-LANRPNFF 125
            |...|:..::........:::|    ||.|.||    :.:|..:.   |||..:.| .:|.....
plant   122 DHDVVELNNMHRQIIHTEAFIGHPKVKSAAAAC----RSINSTIK---VDEYVEALRTSNALEIL 179

  Fly   126 DSFDLVIASNLNEQTLLLLAERLWELNVPLIYCRSLGMLGTIRLQIREH-------CIVEAHP 181
            ..:|:::.:..|..:..::::....|..||:...:|||.|  :|.:..|       |:....|
plant   180 SQYDIIVDATDNPPSRYMISDCCVLLGKPLVSGAALGMEG--QLTVYNHNGGPCYRCLFPTPP 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_648435.1 APPBP1_RUB 16..522 CDD:238770 39/180 (22%)
CNX5NP_200324.1 ThiF_MoeB_HesA_family 71..299 CDD:238386 39/179 (22%)
RHOD_ThiF 338..464 CDD:238784
Blue background indicates that the domain is not in the aligned region.

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