DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment APP-BP1 and AXL

DIOPT Version :9

Sequence 1:NP_001261699.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_180800.1 Gene:AXL / 817802 AraportID:AT2G32410 Length:523 Species:Arabidopsis thaliana


Alignment Length:527 Identity:190/527 - (36%)
Similarity:303/527 - (57%) Gaps:17/527 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LSDKSKKYDRQIRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEEDL 75
            :::...|||||:|:|||.||:.||.|::||:|....|.|..|.||:.|||..|:.|||.|:..||
plant     1 MAEPKTKYDRQLRIWGELGQSALETASICLLNCGPTGSEALKNLVIGGIGSITIVDGSKVEIGDL 65

  Fly    76 GNNFFLDSSYLGKSKALACMQLLQELNPDVNGDYVDESADFLLANRPNFFDSFDLVIASNLNEQT 140
            ||||.:|:..:|:|:|......|||||..|..::|:|:.|.|::..|:||..|.||||:.|.|.:
plant    66 GNNFMVDAKSVGQSRAKTVCGFLQELNDSVKANFVEENPDTLISTDPSFFSQFTLVIATQLVEDS 130

  Fly   141 LLLLAERLWELNVPLIYCRSLGMLGTIRLQIREHCIVEAHPDNRQFDLRLEHPFDALREHLDGTE 205
            ::.|.....|.||.|:..||.|:.|.:|:.::||..:|..||:...||||..|:..|:.:::..:
plant   131 MVKLDRICREANVMLVLARSYGLTGFVRISVKEHTAIETKPDHSLDDLRLNSPWPELKSYVESID 195

  Fly   206 VT-------SKVPWLLVLHKYLNVWQKQQADGTQTPRNYKEKNQLKETIREEM-KADEENYEEAI 262
            :.       ..:|::::|.|....|.:..:.  ..|...:|||:.|:.::.:| .||||||:||:
plant   196 LNVEEPAAHKHIPYVVILVKVAEEWAQHHSG--NLPSTREEKNEFKDLVKSKMVSADEENYKEAL 258

  Fly   263 KAVNTAFGAGQVPKSLKAIFEDDACEQLNKKSNVFWIMAKALKHFVIHENEGHLPLPGVLPDMTA 327
            .|....|....:.:.::.| ..|:|.::...|:.||:|..|||.|:.:|..|.:||.|.:|||.:
plant   259 LAAFKVFAPTGISQEIQDI-NHDSCAEVGSNSSDFWVMVAALKEFISNEGGGEVPLEGSMPDMIS 322

  Fly   328 NTDSYIALQHIYRQQALQDADQVYHKCQEYLKQLALPADSIDERSVRLICKEAAGLAVIRGTRIA 392
            :|:.||.||.||..:|..|...:..:.:..|.::.....||.:.:::..||.|..|.|.|...|.
plant   323 STEHYINLQKIYHSKAEADFLSMEQRVKSILVKVGQDPSSISKPTIKSFCKNARKLKVCRYRTIE 387

  Fly   393 EEYEKSS--RLLPLVEDNELQGNLTAYNFALRAYERFLSECGNIPGEC--IVEQDIGRLKSIAAK 453
            :|::..|  .|...:.|....|.:..| ..|||.:||.......||:.  ..::|..:||:||..
plant   388 DEFKSPSTTELHKYLADENYSGAIGFY-ILLRAVDRFAGTYKKFPGQFDGSTDEDASQLKTIALS 451

  Fly   454 MLSDLGMHA-TISDDVLHEICRYGGAELHAVSAFIGGCAAQEVIKIITKQYKPIDNTFIYNAITT 517
            :||::|... .:.:::.:|:||:|.||:|.|:|.|||..:|||||:||||:.|...|||:|.|..
plant   452 LLSEMGCDGYELQEELYNEMCRFGAAEIHVVAALIGGITSQEVIKLITKQFVPKRGTFIFNGIDH 516

  Fly   518 ESVTLKL 524
            :|.:|.|
plant   517 KSQSLTL 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_001261699.1 APPBP1_RUB 16..522 CDD:238770 188/518 (36%)
ThiF 17..>171 CDD:223552 70/153 (46%)
AXLNP_180800.1 APPBP1_RUB 6..521 CDD:238770 188/518 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 348 1.000 Domainoid score I228
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68370
Inparanoid 1 1.050 369 1.000 Inparanoid score I570
OMA 1 1.010 - - QHG54417
OrthoDB 1 1.010 - - D454386at2759
OrthoFinder 1 1.000 - - FOG0003676
OrthoInspector 1 1.000 - - otm3129
orthoMCL 1 0.900 - - OOG6_101722
Panther 1 1.100 - - O PTHR10953
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3040
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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