DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and Uba5

DIOPT Version :9

Sequence 1:NP_001261699.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_079968.2 Gene:Uba5 / 66663 MGIID:1913913 Length:403 Species:Mus musculus


Alignment Length:376 Identity:72/376 - (19%)
Similarity:121/376 - (32%) Gaps:129/376 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ELSDK---SKKYDRQI---RLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADGS 68
            |:||:   |..|.|.:   |:........:....|.:|.|..||..||:.|...|||...:.|..
Mouse    40 EMSDEVLDSNPYSRLMALKRMGIVSDYKKIRTYAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 104

  Fly    69 TVKEEDLGNNFFLDSSYLGKSKALACMQLLQELNPDV-----------------------NGDYV 110
            .|:..:: |..|......|.||..|....|:.:||||                       ||...
Mouse   105 KVELANM-NRLFFQPYQAGLSKVHAAEHTLRNINPDVLFEVHNYNITTVEHFEHFMNRISNGGLE 168

  Fly   111 D-ESADFLLANRPNFFDSFD--------------------------------------------- 129
            : :..|.:|    :..|:|:                                             
Mouse   169 EGQPVDLVL----SCVDNFEARMAINTACNELGQTWMESGVSENAVSGHIQLMIPGESACFACAP 229

  Fly   130 -LVIASNLNEQTLLLLAERLWELNVPLIYCRSLGML-----------GTIRLQIREHCIVEAHP- 181
             ||:|||::|:|  |..|.:...::|.......|:|           ||:...:..:.:.:..| 
Mouse   230 PLVVASNIDEKT--LKREGVCAASLPTTMGVVAGILVQNVLKFLLKFGTVSFYLGYNAMQDFFPT 292

  Fly   182 ----DNRQFDLRLEHPFDALREHLDGTEVTSKVPWLLVLHKYLNVWQKQQADGTQTPRNYKEKNQ 242
                .|.|.|.:     :..::..:..:..:.:|             .|:|:..:......|.|:
Mouse   293 MFMKPNPQCDDK-----NCRKQQEEYKKRAAALP-------------TQEAEPQEEAEVVHEDNE 339

  Fly   243 -----LKETIREEMKADEENYEEAIKAVNTAFGAGQVPKSLKAIFEDDACE 288
                 :.|...||:|..........:.:..|:   .|||..    ||.|.|
Mouse   340 WGIELVSEVSEEELKNSSGPVPTLPEGITVAY---TVPKKT----EDSASE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_001261699.1 APPBP1_RUB 16..522 CDD:238770 68/367 (19%)
ThiF 17..>171 CDD:223552 47/237 (20%)
Uba5NP_079968.2 ThiF_MoeB_HesA_family 50..293 CDD:238386 48/249 (19%)
ThiF 51..307 CDD:279270 51/267 (19%)
UFM1-interacting sequence (UIS). /evidence=ECO:0000250|UniProtKB:Q9GZZ9 333..345 2/11 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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