DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and uba2

DIOPT Version :9

Sequence 1:NP_001261699.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001017091.1 Gene:uba2 / 549845 XenbaseID:XB-GENE-977709 Length:641 Species:Xenopus tropicalis


Alignment Length:438 Identity:93/438 - (21%)
Similarity:157/438 - (35%) Gaps:102/438 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LLEAAT---VCLVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEEDLGNNFFLDSSYLGKSKALA 93
            |.||.:   :.:|....:|||..|.|||.|.....|.|..|:...:|...|.....::|:|||..
 Frog    11 LAEAVSTSRLLVVGAGGIGCELLKNLVLTGFINLDVIDLDTIDVSNLNRQFLFQKKHVGRSKAQV 75

  Fly    94 CMQLLQELNPD----------VNGDYVDESADFLLANRPNFFDSFDLVI------ASNLNEQTLL 142
            ..:.:.:..|:          :|.||..|           ||..|.:|:      |:..:...:.
 Frog    76 AKESVLQFCPEANITAYHDSIMNPDYNVE-----------FFKQFTMVMNALDNNAARNHVNRMC 129

  Fly   143 LLAERLWELNVPLIYCRSLGMLG---TIRLQIREHCIVEAHPDNRQFDLRLEHPFDALREHLDGT 204
            |.|      .:|||...:.|.||   .::..:.|....:..|..:.|      |...:|      
 Frog   130 LAA------GIPLIESGTAGYLGQVTVVKKGVTECYECQPKPTQKTF------PGCTIR------ 176

  Fly   205 EVTSKVPWLLVLHKYL--NVWQKQQADGTQTPRNYKEKNQLKETIREEMKADEENYEEAIKAVNT 267
            ...|:....:|..|||  .::.::.||....| :..:.....:..:...:|:..|.:..||.|:|
 Frog   177 NTPSEPIHCIVWAKYLFNQLFGEEDADQEVAP-DIADPEAAWDPTQAAERANASNVDGDIKRVST 240

  Fly   268 ---AFGAGQVP-KSLKAIFEDDACEQLNKKSNVFWIMAK---ALKHFVIHENEGHLPLPGVLPDM 325
               |...|..| |....:|.||....|.  .:..|...|   .|:...:|..|.           
 Frog   241 KQWAKSTGYDPIKLFNKLFRDDIKYLLT--MDRLWRKRKPPVPLEWSSLHNKEN----------- 292

  Fly   326 TANTDSYIALQHIYRQQALQ--DADQVYHKCQEYLKQLALPADSIDERSVRLICKEAAGLAVIRG 388
            .:.|.:..:||.:..|:.|.  ...|::.|..|.|:      :.:.|:.              .|
 Frog   293 CSETQNESSLQGLKDQKVLDVTSCAQLFSKSVETLR------EQLREKG--------------NG 337

  Fly   389 TRIAEEYEKSSRLLPLVEDNELQGNLTAYNFALRAYERF--LSECGNI 434
            ..:.  ::|...  |.::......||..:.|::....||  .|..|||
 Frog   338 AELV--WDKDDP--PAMDFVTAAANLRMHIFSMNMKSRFDVKSMAGNI 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_001261699.1 APPBP1_RUB 16..522 CDD:238770 93/438 (21%)
ThiF 17..>171 CDD:223552 39/160 (24%)
uba2NP_001017091.1 Uba2_SUMO 19..442 CDD:238766 90/430 (21%)
UBA_e1_thiolCys 179..360 CDD:371150 41/218 (19%)
UAE_UbL 450..536 CDD:373253
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..641
UBA2_C 549..636 CDD:374424
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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