DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and mocs3

DIOPT Version :10

Sequence 1:NP_648435.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_956421.2 Gene:mocs3 / 393095 ZFINID:ZDB-GENE-040426-782 Length:459 Species:Danio rerio


Alignment Length:460 Identity:96/460 - (20%)
Similarity:171/460 - (37%) Gaps:101/460 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SDKSKKYDRQIRL--WGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEED 74
            :|...:|.||:.|  .|..||..:...:|.:|....:||..|:.|...|||...:.|...|:..:
Zfish    57 NDDIMRYSRQLLLPELGVKGQIAISNISVLVVGCGGLGCPLAQYLAAAGIGRLGLLDYDVVELSN 121

  Fly    75 LGNNFFLDSSYLGKSKALACMQLLQELNPDVNGDYVDESADFLLANRPNFFDSFDLVIASNLNEQ 139
            |...........|:.|||:..|.:..:|..|  ..|.........|.......:|:|...:.|..
Zfish   122 LHRQVLHTELTQGQPKALSAAQAISRMNSTV--QCVPYHLQLSRENAIQLIQQYDIVADCSDNVP 184

  Fly   140 TLLLLAERLWELNVPLIYCRSLGMLGTIRLQIREH-------CIVEAHPDNRQFDLRLEHPFDAL 197
            |..|:.:.....:.||:...:|.|.|  :|.:..:       |:....|           |.:.:
Zfish   185 TRYLVNDACVLTSRPLVSASALRMEG--QLTVYNYRGGPCYRCLYPIPP-----------PPETV 236

  Fly   198 REHLDGTEVTSKVPWLLVLHKYLNVWQ---------KQQA---DGTQTP-RNYKEKNQLKETI-- 247
            ....|| .|...||.::...:.|.|.:         .||.   ||.||. |:.:.:::.||.:  
Zfish   237 TNCSDG-GVLGVVPGIMGCLQALEVLKIASGQECSFAQQLLMFDGEQTRFRSIRLRSRQKECVVC 300

  Fly   248 -REEMKADEENYEEAIKAVNTAFGAGQVPKSLKAIFEDDACEQLNKKSNVFWIMAKALKHFVIHE 311
             .:....:.::||....:..|                 |.|.:|:..|....:..:..|..:.|.
Zfish   301 GEKPTITELQDYEHFCGSAAT-----------------DKCRRLHLLSREQRVSVQDYKGILDHS 348

  Fly   312 NEGHLPL---PGVLPDMTANTDS-YIAL--------QHI-YRQQALQDADQVYHKCQEYLKQLAL 363
            .. ||.|   |.|..|:...::| :|.|        :|| ..::|:.|       .||:|...: 
Zfish   349 TP-HLLLDVRPKVEVDICRLSNSLHIPLASLEDKKPEHITLLKEAISD-------LQEHLNNQS- 404

  Fly   364 PADSIDERSVRLICKEAAGLAVIRGTRIAEEYEKSSRLLPLVEDNELQGNLTAYNFA--LRAYER 426
            |.      .|.::||            :..:.:|:.:||..:...|::. :|..:.:  |.|:.:
Zfish   405 PV------QVFVVCK------------LGNDSQKAVQLLEKMSGAEVEA-MTVKDISGGLMAWAK 450

  Fly   427 FLSEC 431
            .:..|
Zfish   451 KIDHC 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_648435.1 APPBP1_RUB 16..522 CDD:238770 95/456 (21%)
mocs3NP_956421.2 None

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