DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and Atg7

DIOPT Version :10

Sequence 1:NP_648435.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_008761461.1 Gene:Atg7 / 312647 RGDID:1304817 Length:703 Species:Rattus norvegicus


Alignment Length:441 Identity:67/441 - (15%)
Similarity:116/441 - (26%) Gaps:211/441 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LVNVTAVGCETAKGLVLPGIGGFTVADGSTVK------------EEDLGNNFFLDSSYLGKSKAL 92
            |:....:||..|:.|:..|:...|..|.:.:.            |:.||.         ||.|||
  Rat   356 LLGAGTLGCNVARTLMGWGVRHVTFVDNAKISYSNPVRQPLYEFEDCLGG---------GKPKAL 411

  Fly    93 ACMQLLQELNPDVNGDYVDESADFLLANRPNFFDSFDLVIASNLNEQTLLLLAERLWELNVPLIY 157
            |..:.||::.|.||                          ||..|             :::|:  
  Rat   412 AAAERLQKIFPGVN--------------------------ASGFN-------------MSIPM-- 435

  Fly   158 CRSLGMLGTIRLQIREHCIVEAHPDNRQFDLRLEHPFDALREHLDGTEVTSKVPWLLVLHKYLNV 222
                                ..||.|                                       
  Rat   436 --------------------PGHPVN--------------------------------------- 441

  Fly   223 WQKQQADGTQTPRNYKEKNQLKETIREEMKADEENYEEAIKAVNTAFGAGQVPKSLKAIFEDDAC 287
                                ..:...|:.:.|.|..||.|.:.:..|           :..|   
  Rat   442 --------------------FSDVTMEQARRDVEQLEELIDSHDVIF-----------LLMD--- 472

  Fly   288 EQLNKKSNVFW---IMAKALKHFVIHENEGHLPLPGVLPDMTANTDSYIALQHIYRQQALQDADQ 349
               .::|.  |   ::|.:.:..||:...|.              |:::.::|..::...|.|..
  Rat   473 ---TRESR--WLPTVIAASKRKLVINAALGF--------------DTFVVMRHGLKKPKQQGAGD 518

  Fly   350 VYHKCQEYL------------------------KQLALPADSIDERSVRLICK-EAAGLAVIRGT 389
            :   |..:|                        ..:..|.||..:|::...|. ...|||||.|.
  Rat   519 L---CPSHLVAPADLGSSLFANIPGYKLGCYFCNDVVAPGDSTRDRTLDQQCTVSRPGLAVIAGA 580

  Fly   390 RIAE------EYEKSSRLLPLVEDNELQGNLTAYNFALRAYERFLSECGNI 434
            ...|      ::.:....:....|:.:....|:..........|||...|:
  Rat   581 LAVELMVSVLQHPEGGYAIASSSDDRMNEPPTSLGLVPHQIRGFLSRFDNV 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_648435.1 APPBP1_RUB 16..522 CDD:238770 67/441 (15%)
Atg7XP_008761461.1 E1_like_apg7 11..688 CDD:273590 67/441 (15%)

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