DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and Mocs3

DIOPT Version :9

Sequence 1:NP_001261699.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001101274.1 Gene:Mocs3 / 311655 RGDID:1307044 Length:458 Species:Rattus norvegicus


Alignment Length:464 Identity:99/464 - (21%)
Similarity:161/464 - (34%) Gaps:112/464 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PAPKSPELS-DKSKKYDRQIRL--WGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVA 65
            |.|....|| |:..:|.||:.|  .|..||..|.||:|.:|....:||..|:.|...|:|...:.
  Rat    46 PLPSRAALSRDEILRYSRQLLLPELGVRGQLRLAAASVLVVGCGGLGCPLAQYLAAAGVGRLGLV 110

  Fly    66 DGSTVKEEDLGNNFFLDSSYLGKSKALACMQLLQELNPDVNGDYVDESADFLLANRPNFFDSFDL 130
            |...|:..:|........:..|.:||.:....|:.||..|  :||..:.....|...:....:|:
  Rat   111 DHDVVETSNLARQVLHGEAQAGHAKAWSAAAALRRLNSAV--EYVPYARALSEAWALDLVRGYDV 173

  Fly   131 VIASNLNEQTLLLLAERLWELNVPLIYCRSLGMLGTIRLQIRE-----HCIVEAHPDNRQFDLRL 190
            |...:.|..|..|:.:.......||:...:|...|.:.:...:     .|:....|         
  Rat   174 VADCSDNVPTRYLVNDACVLAGRPLVSASALRFEGQMTVYHYDDGPCYRCVFPRPP--------- 229

  Fly   191 EHPFDALREHLDGTEVTSKVPWLLVLHKYLNVWQKQQADGTQTPRNYKEKNQLKE-------TIR 248
              |.:.:....|| .|...||.:|...:.|.|.:.....||    .|.....|.:       .||
  Rat   230 --PAETVTNCADG-GVLGVVPGVLGCVQALEVLKIAAGLGT----TYSGSMLLFDGLGGHFRRIR 287

  Fly   249 EEMKADE-------------ENYEEAIKAVNTAFGAGQVPKSLKAIFEDDACEQLNKKSNVFWIM 300
            ...:..:             :|||        ||.....         .|.|..|...|....|.
  Rat   288 LRRRRPDCVVCGQQPTVTCLKNYE--------AFCGSSA---------TDKCRSLKLLSPEERIS 335

  Fly   301 AKALKHFVIHENEGHLPLPGVLPDMTANTDSYIALQHIYRQQALQDADQVYHKCQEYLKQLALPA 365
            ....|..:   :.|   :|.||.|:              |.|...|..::.|       .|.:|.
  Rat   336 VTDYKRLL---DSG---VPHVLLDV--------------RPQVEVDICRLQH-------SLHIPL 373

  Fly   366 DSIDER---SVRLI----------CKEAAGLAVIRGTRIAEEYEKSSRLL------PLVED---N 408
            ..::.|   |::|:          .:|.|.|||....::..:.:|:.|:|      |.::.   .
  Rat   374 SLLERRDADSLKLLGAALQEEKRNSQEGAALAVYVICKLGNDSQKAVRVLQSLTAVPELDSLKVQ 438

  Fly   409 ELQGNLTAY 417
            ::.|.|.|:
  Rat   439 DISGGLMAW 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_001261699.1 APPBP1_RUB 16..522 CDD:238770 94/451 (21%)
ThiF 17..>171 CDD:223552 40/155 (26%)
Mocs3NP_001101274.1 PRK07411 53..458 CDD:180967 97/457 (21%)
ThiF_MoeB_HesA_family 60..283 CDD:238386 55/240 (23%)
RHOD_ThiF 325..458 CDD:238784 30/150 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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