DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and Sae1

DIOPT Version :9

Sequence 1:NP_001261699.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001012063.1 Gene:Sae1 / 308384 RGDID:1306098 Length:349 Species:Rattus norvegicus


Alignment Length:507 Identity:101/507 - (19%)
Similarity:163/507 - (32%) Gaps:190/507 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DKSKKYDRQIRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEEDLGN 77
            :::.:|||||||||...|..|.|:.|.:|.:..:|.|.||.|:|.|:.|.|:.|...|..||||.
  Rat    17 EEAAQYDRQIRLWGLEAQKRLRASRVLIVGMKGLGAEIAKNLILAGVKGLTMLDHEQVSPEDLGA 81

  Fly    78 NFFLDSSYLGKSKALACMQLLQELNP--DVNGDYVDESADFLLANRP-NFFDSFDLVIASNLNEQ 139
            .|.:.:..:|:::|.|.::..|.|||  ||..|..|      :..:| :||..||.|..:..::.
  Rat    82 QFLIRTGSVGQNRAEASLERAQNLNPMVDVKVDTED------IEKKPESFFTEFDAVCLTCCSKD 140

  Fly   140 TLLLLAERLWELNVPLIYCRSLGMLGTIRLQIREHCIVEAHPDNRQFDLRLEHPFDALREHLDGT 204
            .::.:.:.....::........|..|.....:.||..||......:....:|...||.|..||.:
  Rat   141 VIIKVDQICHRNSIKFFTGDVFGYHGYTFANLGEHEFVEEKTKVTKVSQGVEDGPDAKRAKLDSS 205

  Fly   205 EVTSKVPWLLVLHKYLNVWQKQQADGTQTPRNYKEKNQLKETIREEMKADEENYEEAIKAVNTAF 269
            |.|                                                              
  Rat   206 ETT-------------------------------------------------------------- 208

  Fly   270 GAGQVPKSLKAIFEDDACEQLNKKSNVFWIMAKALKHFVIHENEGHLPLPGVLPDMTANTDSYIA 334
                                :.||..:|..:.:||.                             
  Rat   209 --------------------MVKKKVLFCPVKEALA----------------------------- 224

  Fly   335 LQHIYRQQALQDADQVYHKCQEYLKQLALPADSIDERSVRLICKEAAGLAVIRGTRIAEEYEKSS 399
                        .|....|.|..||                              |.|.:|    
  Rat   225 ------------VDWSGEKAQAALK------------------------------RTAPDY---- 243

  Fly   400 RLLPLVEDNELQGNLTAYNFALRAYERFLSECGNIPGECIVEQDIGRLKSIAAKMLSDLGMHATI 464
                               |.|:...:|.::.|..|......:|...|..|...:...||    :
  Rat   244 -------------------FLLQVLLKFRTDKGRDPTSDSYSEDAELLLQIRNDVFDSLG----V 285

  Fly   465 SDDVL-HEICRYGGAELHAVSAFIGGCAAQEVIKIITKQYKPIDNTFIYNAI 515
            |.|:| .:..||..:|:..|.|.:||..|||::|.::::..|.:|.|.::.:
  Rat   286 SPDLLPDDFVRYCFSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGM 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_001261699.1 APPBP1_RUB 16..522 CDD:238770 101/504 (20%)
ThiF 17..>171 CDD:223552 49/156 (31%)
Sae1NP_001012063.1 Aos1_SUMO 19..344 CDD:238769 101/505 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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