DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and Uba1

DIOPT Version :10

Sequence 1:NP_648435.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_033483.3 Gene:Uba1 / 22201 MGIID:98890 Length:1058 Species:Mus musculus


Alignment Length:563 Identity:112/563 - (19%)
Similarity:178/563 - (31%) Gaps:193/563 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSPAPK-----SPELSDKSK---------------------KYDRQIRLWGEHGQTLLEAATVC 39
            :|.|.||     ||..|..|:                     .|.||:.:.|.....:|:.::|.
Mouse    12 VSGPDPKPGSNCSPAQSALSEVSSVPTNGMAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVL 76

  Fly    40 LVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEEDLGNNFFLDSSYLGKSKALACMQLLQELNPD 104
            :..:..:|.|.||.::|.|:...|:.|..|.:..||.:.|:|....:||::|......|.|||..
Mouse    77 VSGLRGLGVEIAKNIILGGVKAVTLHDQGTTQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSY 141

  Fly   105 V-----NGDYVDESADFLLANRPNFFDSFDLVIASNLNEQTLLLLAERLWELNVPLIYCRSLGML 164
            |     .|..|::           |..||.:|:.:|...:..|.:.|......:.|:...:.|:.
Mouse   142 VPVTAYTGPLVED-----------FLSSFQVVVLTNSPLEAQLRVGEFCHSRGIKLVVADTRGLF 195

  Fly   165 GTIRLQIREHCIVEAHPDNRQFDLRLEHPFDA---------------LREHLDGTEVTSKVPWLL 214
            |.:.....|..::.        |...|.|..|               |.|...|.|....|    
Mouse   196 GQLFCDFGEEMVLT--------DSNGEQPLSAMVSMVTKDNPGVVTCLDEARHGFETGDFV---- 248

  Fly   215 VLHKYLNVWQKQQADGTQTPRNYKEKNQLKETIREEMKADEENYEEAIKA--VNTAFGAGQVPKS 277
               .:..|....|.:|.| |...|.......:|     .|..|:.:.|:.  |:..    :||| 
Mouse   249 ---SFSEVQGMIQLNGCQ-PMEIKVLGPYTFSI-----CDTSNFSDYIRGGIVSQV----KVPK- 299

  Fly   278 LKAIFEDDACEQLNKKSNVFWIMAKALKHFVIHENEGHLPLPGVLPDMTANTDSYIALQHIYRQQ 342
                       :::.||                     ||...|.||... ||    .....|..
Mouse   300 -----------KISFKS---------------------LPASLVEPDFVM-TD----FAKYSRPA 327

  Fly   343 ALQDADQVYHKCQEYLKQLALPADSIDERSVRLICKEAAGLAVIRGTRIAEEYEKSSRLLPLVED 407
            .|....|..|:......|...|.:..|       ..|..|||          ...::|..|.|:.
Mouse   328 QLHIGFQALHQFCALHNQPPRPRNEED-------ATELVGLA----------QAVNARSPPSVKQ 375

  Fly   408 NELQGNLTAYNFALRAYERFLSECGNIPGECIVEQDIGRLKSIAAKMLSDLGMHATISDDVLHEI 472
            |.|                                                      .:|::.::
Mouse   376 NSL------------------------------------------------------DEDLIRKL 386

  Fly   473 CRYGGAELHAVSAFIGGCAAQEVIKIITKQYKPIDNTFIYNAI 515
            ......:|..::|||||.|||||:|..:.::.||.....::|:
Mouse   387 AYVAAGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDAL 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_648435.1 APPBP1_RUB 16..522 CDD:238770 104/543 (19%)
Uba1NP_033483.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46 8/33 (24%)
2 approximate repeats 63..611 101/512 (20%)

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