DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and moc-3

DIOPT Version :9

Sequence 1:NP_001261699.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_501359.1 Gene:moc-3 / 177607 WormBaseID:WBGene00018357 Length:402 Species:Caenorhabditis elegans


Alignment Length:182 Identity:48/182 - (26%)
Similarity:78/182 - (42%) Gaps:18/182 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SKK----YDRQIRL--WGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEE 73
            |||    |.||:.:  :|..||..|:...|.:|....:||..|..|...|||...:.|...:..:
 Worm    11 SKKDAGRYSRQLLVDDFGVSGQKNLKNLNVLIVGAGGLGCPVATYLGAAGIGTIGIVDYDHISLD 75

  Fly    74 DLGNNFFLDSSYLGKSKALACMQLLQELNPDVNGDYVDESADFLLANRPNFFDSFDLVIASNLNE 138
            :|..........:|||||.|....::..|.|:|....:.|.|  .:|....|.::::|.....|.
 Worm    76 NLHRQVAYKEDQVGKSKAQALADNIKLQNSDLNVQVHNTSLD--SSNAMQLFKNYEIVCDCTDNV 138

  Fly   139 QTLLLLAERLWELNVPLIYCRSLGMLGTIRLQIREH--------CIVEAHPD 182
            .|..|:.:....||:||:...:|...|  :|.:..:        |:..:.||
 Worm   139 ATRYLINDVCVLLNIPLVSGSALRWDG--QLSVYHYGSDCPCYRCLFPSPPD 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_001261699.1 APPBP1_RUB 16..522 CDD:238770 47/181 (26%)
ThiF 17..>171 CDD:223552 43/159 (27%)
moc-3NP_501359.1 PRK07878 8..402 CDD:181156 48/182 (26%)
ThiF_MoeB_HesA_family 17..246 CDD:238386 45/176 (26%)
RHOD_ThiF 283..402 CDD:238784
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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