DRSC/TRiP Functional Genomics Resources

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Protein Alignment APP-BP1 and Uba5

DIOPT Version :10

Sequence 1:NP_648435.1 Gene:APP-BP1 / 39244 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_319759.5 Gene:Uba5 / 1279970 VectorBaseID:AGAMI1_002275 Length:389 Species:Anopheles gambiae


Alignment Length:243 Identity:52/243 - (21%)
Similarity:78/243 - (32%) Gaps:92/243 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KKYDRQIRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEEDLGNNFF 80
            |:|:|            :...:|.:|.|..||..||..|...|||...:.|...|:..:: |..|
Mosquito    41 KEYER------------IRQKSVAVVGVGGVGSVTADMLTRCGIGKLMLFDYDKVELANM-NRLF 92

  Fly    81 LDSSYLGKSKALACMQLLQELNPDV-------NGDYVDESADFLLANRP---------------- 122
            ......|.||..|..:.|..:||||       |...||....||.|.|.                
Mosquito    93 FTPDQAGLSKVEAAAKTLNFINPDVAITTHNYNITTVDNFDHFLGAIRTGGIEQGTPVDLVLSCV 157

  Fly   123 ------------------NFFDSF-------------------------DLVIASNLNEQTLLLL 144
                              |:|:|.                         .||:|.|::|:|  |.
Mosquito   158 DNFEARMAINTACNELSLNWFESGVSENAVSGHIQFIRPGETACFACAPPLVVAENIDEKT--LK 220

  Fly   145 AERLWELNVPLIYCRSLGML-----------GTIRLQIREHCIVEAHP 181
            .|.:...::|.......|||           ||:...:..:.:::..|
Mosquito   221 REGVCAASLPTTMGIVAGMLVQNTLKYLLNFGTVSDYLGYNAMIDFFP 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_648435.1 APPBP1_RUB 16..522 CDD:238770 52/243 (21%)
Uba5XP_319759.5 None

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