DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irbp18 and cebpb

DIOPT Version :10

Sequence 1:NP_648434.1 Gene:Irbp18 / 39243 FlyBaseID:FBgn0036126 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_001030293.1 Gene:cebpb / 619595 XenbaseID:XB-GENE-479779 Length:145 Species:Xenopus tropicalis


Alignment Length:82 Identity:27/82 - (32%)
Similarity:51/82 - (62%) Gaps:5/82 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RTAASTSKNSDSPLSPHTDDPAYKEKRKKNNEAVQRTREKTKKSAEERKKRIDDLRKQNDALKVQ 70
            ::.:|..|.|   |..|:|:  ||.:|::||.||:::|:|.|....|.:.::.:|..:|:.|:.:
 Frog    57 KSGSSKGKKS---LDKHSDE--YKIRRERNNIAVRKSRDKAKIRNMETQHKVLELSAENERLQKR 116

  Fly    71 IETSEKHISTLRDLIIQ 87
            :|...:.:||||:|..|
 Frog   117 VEQLSRELSTLRNLFKQ 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irbp18NP_648434.1 bZIP_CEBP 24..83 CDD:269841 19/58 (33%)
coiled coil 25..83 CDD:269841 18/57 (32%)
cebpbNP_001030293.1 bZIP_CEBPB 67..134 CDD:269860 24/69 (35%)
coiled coil 71..132 CDD:269860 21/62 (34%)

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