DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irbp18 and Nfil3

DIOPT Version :9

Sequence 1:NP_001261698.1 Gene:Irbp18 / 39243 FlyBaseID:FBgn0036126 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_059069.1 Gene:Nfil3 / 18030 MGIID:109495 Length:462 Species:Mus musculus


Alignment Length:68 Identity:22/68 - (32%)
Similarity:37/68 - (54%) Gaps:2/68 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KKRTAASTSKNSDSPLSPHTDDPAYKEKRKKNNEAVQRTREKTKKSAEERKKRIDDLRKQNDALK 68
            |.:::|...|....|  ....|..|.|||:|||||.:|:|||.:.:....:.::..|.::|..||
Mouse    54 KNKSSACRRKREFIP--DEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLK 116

  Fly    69 VQI 71
            .::
Mouse   117 AEL 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irbp18NP_001261698.1 bZIP_CEBP 24..83 CDD:269841 18/48 (38%)
coiled coil 25..83 CDD:269841 18/47 (38%)
Nfil3NP_059069.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
bZIP_NFIL3 72..131 CDD:269842 18/48 (38%)
coiled coil 76..127 CDD:269842 17/44 (39%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 79..95 11/15 (73%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 99..106 0/6 (0%)
Vert_IL3-reg_TF 130..461 CDD:368956
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..214
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..298
Necessary for transcriptional repression and sufficient for interaction with PER2. /evidence=ECO:0000269|PubMed:17274955 281..420
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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