DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irbp18 and atf-8

DIOPT Version :9

Sequence 1:NP_001261698.1 Gene:Irbp18 / 39243 FlyBaseID:FBgn0036126 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_504576.1 Gene:atf-8 / 178998 WormBaseID:WBGene00017535 Length:241 Species:Caenorhabditis elegans


Alignment Length:103 Identity:27/103 - (26%)
Similarity:48/103 - (46%) Gaps:19/103 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AKKRTAASTSKNSDSPLS-------------------PHTDDPAYKEKRKKNNEAVQRTREKTKK 48
            |:..::..:|.:|.||.|                   ....|.||.|:|:|||:|.:|:|::.:.
 Worm    75 AESCSSRDSSHDSSSPTSTGGSSRDNVIVRNELKRKKDQVKDVAYWERRRKNNDAAKRSRDQRRM 139

  Fly    49 SAEERKKRIDDLRKQNDALKVQIETSEKHISTLRDLII 86
            ..:|...|...|.::|..|:|:::........||.||:
 Worm   140 KEDEMAHRATSLERENMLLRVELDQLRAETDKLRALIL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irbp18NP_001261698.1 bZIP_CEBP 24..83 CDD:269841 18/58 (31%)
coiled coil 25..83 CDD:269841 18/57 (32%)
atf-8NP_504576.1 bZIP_HLF 115..174 CDD:269843 18/58 (31%)
coiled coil 119..170 CDD:269843 15/50 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.