DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irbp18 and Cebpa

DIOPT Version :10

Sequence 1:NP_648434.1 Gene:Irbp18 / 39243 FlyBaseID:FBgn0036126 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_001274443.1 Gene:Cebpa / 12606 MGIID:99480 Length:396 Species:Mus musculus


Alignment Length:85 Identity:26/85 - (30%)
Similarity:47/85 - (55%) Gaps:14/85 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AKKRTAASTSKNSDSPLSPHTDDPAYKEKRKKNNEAVQRTREKTKKSAEERKKRIDDLRKQNDAL 67
            |||    |..|||:.          |:.:|::||.||:::|:|.|:...|.::::.:|...||.|
Mouse   312 AKK----SVDKNSNE----------YRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRL 362

  Fly    68 KVQIETSEKHISTLRDLIIQ 87
            :.::|...:.:.|||.:..|
Mouse   363 RKRVEQLSRELDTLRGIFRQ 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irbp18NP_648434.1 bZIP_CEBP 24..83 CDD:269841 17/58 (29%)
coiled coil 25..83 CDD:269841 17/57 (30%)
CebpaNP_001274443.1 bZIP_CEBPA 318..378 CDD:269859 20/69 (29%)
coiled coil 320..378 CDD:269859 18/67 (27%)

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