DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irbp18 and si:dkey-172o19.2

DIOPT Version :9

Sequence 1:NP_001261698.1 Gene:Irbp18 / 39243 FlyBaseID:FBgn0036126 Length:113 Species:Drosophila melanogaster
Sequence 2:XP_005170589.1 Gene:si:dkey-172o19.2 / 100000812 ZFINID:ZDB-GENE-070424-213 Length:329 Species:Danio rerio


Alignment Length:114 Identity:31/114 - (27%)
Similarity:50/114 - (43%) Gaps:32/114 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RTAASTSKNSDSPLSP-HTDDPAYKEKRKKNNEAVQRTREKTKKSAEERKKRIDD---------L 60
            |....||:.....::| ...|.:|..||||||||.:|:||         |:|::|         |
Zfish    55 RNPLITSRRRKREMTPSEKKDASYWVKRKKNNEAAKRSRE---------KRRLNDFMLEGQLLAL 110

  Fly    61 RKQNDALKVQIETSEKHISTLRDLIIQGEKTEDGHRIIQEILAEPDPDP 109
            .::|..|:.::.:.:.|:...|.|.:       .|.|:      |.|.|
Zfish   111 SEENAQLRAEVLSLQYHMGIARSLDV-------NHPIM------PFPYP 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irbp18NP_001261698.1 bZIP_CEBP 24..83 CDD:269841 20/67 (30%)
coiled coil 25..83 CDD:269841 20/66 (30%)
si:dkey-172o19.2XP_005170589.1 bZIP_NFIL3 74..133 CDD:269842 20/67 (30%)
coiled coil 75..133 CDD:269842 20/66 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.