DRSC/TRiP Functional Genomics Resources

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Protein Alignment JIL-1 and Prkcq

DIOPT Version :10

Sequence 1:NP_648432.1 Gene:JIL-1 / 39241 FlyBaseID:FBgn0020412 Length:1207 Species:Drosophila melanogaster
Sequence 2:NP_001263650.1 Gene:Prkcq / 85420 RGDID:620968 Length:707 Species:Rattus norvegicus


Alignment Length:427 Identity:139/427 - (32%)
Similarity:215/427 - (50%) Gaps:65/427 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 SSTTPSYAMPTSN---------STPLD-LDNEAHQRDLE-----AVTDLKYYVKLYSDEAVSLND 260
            |.|.|. .:||..         .:||| .|..|...:.|     |...||          :.::|
  Rat   326 SETRPP-CVPTPGKKEPQGICWESPLDGADKTAQPPEPEVNLQRASLQLK----------LKIDD 379

  Fly   261 FKIIRVLGTGAYGRVFLVR-KLTRHDAGKLYAMKVLNKITVVQKRKTAEHTKTERVVLEAIQRNP 324
            |.:.::||.|::|:|||.. |.|:    :.:|:|.|.| .||......|.|..|:.||.....:|
  Rat   380 FILHKMLGKGSFGKVFLAEFKRTK----QFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEHP 439

  Fly   325 FLVSLHYAFQSSSKLYLVLDFANGGELFTHLYHSENFEESRVRVYIAEVVLALEQLHQLGIIYRD 389
            ||..:...||:...|:.|:::.|||:|..|:.....|:.||...|.||::|.|:.||..||:|||
  Rat   440 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRD 504

  Fly   390 IKLENILLDGEGHIVLSDFGLSKILTAEN---EYRAHSFCGTLEYMAPEIIRTGPPGHDSAVDWW 451
            :||:|||||.:|||.::|||:.|    ||   :.:.::||||.:|:||||:......|  :||||
  Rat   505 LKLDNILLDRDGHIKIADFGMCK----ENMLGDAKTNTFCGTPDYIAPEILLGQKYNH--SVDWW 563

  Fly   452 SVGVLTFELLTGASPFATSDGQVQQSEISRRIQKEQPMIPSSFSANARDFVLKMLEKNPKRRLGG 516
            |.|||.:|:|.|.|||...|    :.|:...|:.:.|..|......|:|.::|:..:.|::|||.
  Rat   564 SFGVLLYEMLIGQSPFHGQD----EEELFHSIRMDNPFYPRWLEREAKDLLVKLFVREPEKRLGV 624

  Fly   517 NHRDASEIKEHPFFNGINWQELRTKRRKAPYKPTLTAEDDVQNFSNEFTDQVPEDPECDAPPSRI 581
            .    .:|::||.|..|||:||..|....|::|.:.:..|..||..||..:.|            
  Rat   625 R----GDIRQHPLFREINWEELERKEIDPPFRPKVKSPYDCSNFDKEFLSEKP------------ 673

  Fly   582 RLFRGYTYVAPEHLEQMRRDNHCEIQYFNTGLQNIPC 618
            ||    ::.....:..|.::......:.|.|::.:.|
  Rat   674 RL----SFADRALINSMDQNMFSNFSFINPGMETLIC 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JIL-1NP_648432.1 STKc_MSK_N 266..533 CDD:270735 103/270 (38%)
S_TK_X 532..591 CDD:214529 16/58 (28%)
S_TKc 632..886 CDD:214567
PrkcqNP_001263650.1 C1_nPKC_theta-like_rpt1 153..213 CDD:410384
C1_nPKC_theta-like_rpt2 232..281 CDD:410387
STKc_nPKC_theta 374..704 CDD:270770 125/374 (33%)
Blue background indicates that the domain is not in the aligned region.

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