DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6321 and Tat

DIOPT Version :10

Sequence 1:NP_648426.1 Gene:CG6321 / 39233 FlyBaseID:FBgn0036117 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_036800.1 Gene:Tat / 24813 RGDID:3820 Length:454 Species:Rattus norvegicus


Alignment Length:428 Identity:86/428 - (20%)
Similarity:166/428 - (38%) Gaps:106/428 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PN--ILNLGVGAP--------GPDILTANCDSFRTATDHCLEREKRENQSLIFQYGPTSGTFEVR 78
            ||  :::|.:|.|        .|::..|..|:        |:..|...      |.|:.|....|
  Rat    69 PNKTVISLSIGDPTVFGNLPTDPEVTQAMKDA--------LDSGKYNG------YAPSIGYLSSR 119

  Fly    79 REISTYFTEMFKSPVNCEDLIITTGASHGLHILLST--------MLDFEGFVFVDEYTYMIALDS 135
            .|:::|: ...::|:..:|:|:|:|.|..:.:.|:.        ::...||.........:.:: 
  Rat   120 EEVASYY-HCHEAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIE- 182

  Fly   136 IKHFSTVTIVPVKLNDDGVDLKDLEEKVSKRRFQSKKKEFWGIYYTIPTYHNPTGILFSPEVCRG 200
            :|.::   ::|.|..:  :|||.||..:.::.          ....:....||.|.:||....:.
  Rat   183 VKLYN---LLPEKSWE--IDLKQLESLIDEKT----------ACLVVNNPSNPCGSVFSKRHLQK 232

  Fly   201 IVQLARNYDFLVVCDDVYNILNYGETPTHSRLLSYDDRNDANFAGHVISNGSFSK-ILGPGVRLG 264
            |:.:|......::.|::|..:.:.:       ..|:...:.:....::|.|..:| .|.||.|||
  Rat   233 ILAVAERQCVPILADEIYGDMVFSD-------CKYEPLANLSTNVPILSCGGLAKRWLVPGWRLG 290

  Fly   265 WLEVPPRLKPILDGSGFATSGGCFNNYTSGIVGSLFELKLAQKQISES---YEAYKERMLATTQ- 325
            |:.:..|    .|..|        |....|:|      ||:|:.:...   ..|.|..:..|.| 
  Rat   291 WILIHDR----RDIFG--------NEIRDGLV------KLSQRILGPCTIVQGALKSILQRTPQE 337

  Fly   326 VLRDEL------PDCC----------KLVSPTGGYFIWVRI-----PDRLDCREFLKYCMENHKI 369
            ...|.|      .|.|          :.|.|:|..::.|.|     |:..:..||.:..:....:
  Rat   338 FYHDTLSFLKSNADLCYGALAAIPGLQPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQAV 402

  Fly   370 YFIVGTRFSADGQSGKQFFRLSIAFYPKSKLVDGARRL 407
            :.:..|.|..     ..|||:.|. .|:..:::...|:
  Rat   403 HCLPATCFEY-----PNFFRVVIT-VPEVMMLEACSRI 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6321NP_648426.1 ARO8 <23..414 CDD:440781 86/428 (20%)
TatNP_036800.1 TAT_ubiq 1..40 CDD:462236
tyr_amTase_E 41..442 CDD:273529 86/428 (20%)
Blue background indicates that the domain is not in the aligned region.

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