DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7888 and AVT6

DIOPT Version :9

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_011044.1 Gene:AVT6 / 856855 SGDID:S000000921 Length:448 Species:Saccharomyces cerevisiae


Alignment Length:461 Identity:87/461 - (18%)
Similarity:176/461 - (38%) Gaps:108/461 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LLKGSLGTGILAMPNAFRNSGYITGSIGTIVIGFICTFCIHQLVKAQYELCRRKKMPSMNYPMVA 126
            ||..:.|.||||||.||:..|.|.|    :::..:|..|..|.:..|..:.  |.:|.......|
Yeast    12 LLHTACGAGILAMPYAFKPFGLIPG----VIMIVLCGACAMQSLFIQARVA--KYVPQGRASFSA 70

  Fly   127 ETAMGEGPKCFRVFAPYIGTVVNTFLLIYQLGTCCVYVVFVASNIKAIVDA------VADTSIDV 185
            .|         |:..|.:|.|.:..:.|...|....|::.|...:..|:..      :.:.::.:
Yeast    71 LT---------RLINPNLGIVFDLAIAIKCFGVGVSYMIVVGDLMPQIMSVWTRNAWLLNRNVQI 126

  Fly   186 RLCMIIILLPLILINWVRNLKYLAPFSTLANAITMVSFGIICYYIF-------REPVTTEGKDAF 243
            .|.|:..:.||..:..:.:|:|       |:.:.:.|...:|..:.       .|.:..:|:.::
Yeast   127 SLIMLFFVAPLSFLKKLNSLRY-------ASMVAISSVAYLCVLVLLHYVAPSDEILRLKGRISY 184

  Fly   244 GKP---------SNFPLFFGTVLFALEAIGVILPLENEMKTPQKFGGSCGVLNVSMVLIVFLYVG 299
            ..|         :..|:|    :||......:..:.||.:: .:|.....:..:::.|.:.||:.
Yeast   185 LLPPQSHDLNVLNTLPIF----VFAYTCHHNMFSIINEQRS-SRFEHVMKIPLIAISLALILYIA 244

  Fly   300 MGLFGYLNYGSAVLGSITLNMPEHEVLSMCVKGMLAFAIYITHGLACY----------------- 347
            :|..|||.:|..::|:|.:..|: .|.|...:..:...:.:...|.|:                 
Yeast   245 IGCAGYLTFGDNIIGNIIMLYPQ-AVSSTIGRIAIVLLVMLAFPLQCHPARASIHQILQHFAEEN 308

  Fly   348 VAIDITWND----------------------------YVAKRLGAQRNALFWEYAVRTGLVLITF 384
            |:|..|..|                            |..|....:..:..   .:...:::.::
Yeast   309 VSISATSADEPTVATESSPLIRDSSLDLNEVIEEESIYQPKETPLRGKSFI---VITCSILVASY 370

  Fly   385 LLAVAIPNLELFISLFGALCLSALGLAFPALIQICTHWYNTKGFA-KVWLVLSNFVLIIVGIL-- 446
            |:|:::.:|...:::.||...:::....|.|.     .|...|.. |..:.|:..:....|:|  
Yeast   371 LVAISVSSLARVLAIVGATGSTSISFILPGLF-----GYKLIGTEHKTAVPLTTKIFKYTGLLLF 430

  Fly   447 --GLVI 450
              ||:|
Yeast   431 IWGLII 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:294310 87/461 (19%)
SdaC 62..456 CDD:223884 87/461 (19%)
AVT6NP_011044.1 Aa_trans 1..439 CDD:279788 87/461 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346002
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4217
OMA 1 1.010 - - QHG54358
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
TreeFam 00.000 Not matched by this tool.
65.700

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