DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7888 and AT5G02180

DIOPT Version :9

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001331278.1 Gene:AT5G02180 / 831862 AraportID:AT5G02180 Length:550 Species:Arabidopsis thaliana


Alignment Length:451 Identity:100/451 - (22%)
Similarity:185/451 - (41%) Gaps:95/451 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DVEHPTTN----SETLFHLLKGSLGTGILAMPNAFRNSGYITGSIGTIVIGF--ICTFCIHQLVK 106
            |:..|..|    |:::.:......|.|::.||.|.:.||:    :|..::.|  :.|.....|:|
plant   150 DLPLPEPNLCSFSQSVLNGTNVLCGLGLITMPYAIKESGW----LGLPILLFFGVITCYTGVLMK 210

  Fly   107 AQYELCRRKKMPSMNYPMVAETAMGEGPKCFRVFAPYIGTVVNTFLLIYQLGTCCV-YVVFVASN 170
            .    |.........||.:.:.|.|           ..|..:.:.||..:|...|| |::.::.|
plant   211 R----CLESSPGIQTYPDIGQAAFG-----------ITGRFIISILLYVELYAACVEYIIMMSDN 260

  Fly   171 IKAI-----VDAVADTSID----VRLCMIIILLPLILINWVRNLKYLAPFSTLANAITMVSFGII 226
            :..:     :...:..|:|    ..:...:::||.:   |:::|..|: :.::...:..:..||.
plant   261 LSGLFPNVSLSIASGISLDSPQIFAILTTLLVLPTV---WLKDLSLLS-YLSVGGVLASILLGIC 321

  Fly   227 CYYIFREPVTTEGKDAFGKP---SNFPLFFGTVLFALEAIGVILPLENEMKTPQKFGGSCGVLNV 288
            .:::  ..|...|..|.|:.   ||.|:..|...|......|...:.:.||.|.:|         
plant   322 LFWV--GAVDGIGFHATGRVFDLSNLPVTIGIFGFGYSGHSVFPNIYSSMKDPSRF--------- 375

  Fly   289 SMVLIV------FLYVGMGLFGYLNYGSAVLGSITLNMPEH------EVLSMCVKGMLAFAIYIT 341
            .:||::      .||:.:.:.||..:|.||....|||||:|      .|.:..:..|..:|:.||
plant   376 PLVLVICFSFCTVLYIAVAVCGYTMFGEAVESQFTLNMPKHFFPSKVAVWTAVITPMTKYALTIT 440

  Fly   342 HGLACYVAIDITWNDYV--AKRLGAQRNALFWEYAVRTGLVLITFLLAVAIPNLELFISLFGALC 404
                   .|.::..:.:  ||......:.||     ||.||..|.::|:::|...:..:|.|:..
plant   441 -------PIVMSLEELIPTAKMRSRGVSILF-----RTMLVTSTLVVALSVPFFAIVAALIGSFL 493

  Fly   405 LSALGLAFPALIQICTHWYNTKGFAKVWLVLSN------FVLIIVGILGLVIGTYTSLKEI 459
            ...:.|.||.|..:..    .||      .|||      ..:|:.|::....|||:::..:
plant   494 AMLVALIFPCLCYLSI----LKG------KLSNTQIGLCIFIIVFGVVSGCCGTYSAISRL 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:294310 97/440 (22%)
SdaC 62..456 CDD:223884 96/428 (22%)
AT5G02180NP_001331278.1 SLC5-6-like_sbd 160..542 CDD:320982 97/437 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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