DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7888 and CG4991

DIOPT Version :9

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001259638.1 Gene:CG4991 / 32695 FlyBaseID:FBgn0030817 Length:496 Species:Drosophila melanogaster


Alignment Length:464 Identity:150/464 - (32%)
Similarity:231/464 - (49%) Gaps:22/464 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GHSNSAYVADHPDKL--ELAEKGQKNKAVVAKDPDY-NPYHHRDVEHPTTNSETLFHLLKGSLGT 69
            |..|...:..:|::.  .:.|||        .||:. :|...|.  |.|:..|...||.|||:|.
  Fly    46 GRQNDKSLEKNPERFTKNVTEKG--------ADPENGDPVRRRG--HETSELEAATHLFKGSVGA 100

  Fly    70 GILAMPNAFRNSGYITGSIGTIVIGFICTFCIHQLVKAQYELCRRKK-MPSMNYPMVAETAMGEG 133
            |:.||.:.|:|.|....:|...:|..:|..|...|::.......|.. :..::||...|.....|
  Fly   101 GLFAMGDCFKNGGLAGATILLPIIAVMCVHCERMLIRGSVLAVERTPGVDFLDYPETVEKCFEHG 165

  Fly   134 PKCFRVFAPYIGTVVNTFLLIYQLGTCCVYVVFVASNIKAIVDAVADTSIDVRLCMIIILLPLIL 198
            |:..|..:..:..:|..||.:.|.|.|.:|.||:..|:..::.. ....|.:.:.|:|.|||.::
  Fly   166 PRPLRKMSRVMKLIVEMFLCVTQFGFCAIYFVFITENLHQVLQQ-NGIVISMSMVMLITLLPAMI 229

  Fly   199 INWVRNLKYLAPFSTLANAITMVSFGIIC--YYIFRE-PVTTEG-KDAFGKPSNFPLFFGTVLFA 259
            .:.:.||||::|.|..||...:  ||:|.  ...|.: |:.:.| :..|...:...|||||.||:
  Fly   230 PSLMTNLKYISPVSLFANVALL--FGLIATLTIAFSDGPMPSVGDRHLFTGGAQLALFFGTALFS 292

  Fly   260 LEAIGVILPLENEMKTPQKFGGSCGVLNVSMVLIVFLYVGMGLFGYLNYGSAVLGSITLNMPEHE 324
            .|.|.:||||.|.|:.|:||....||||.:|.....|::..|...|:.:|..|.||||||:...|
  Fly   293 YEGIALILPLRNSMRRPEKFSTRFGVLNSTMFFTTALFIFTGFVSYVRWGEEVAGSITLNLVVEE 357

  Fly   325 VLSMCVKGMLAFAIYITHGLACYVAIDITWNDYVAKRLGAQRNALFWEYAVRTGLVLITFLLAVA 389
            |.|..||.:.|..:::.:.:..:|.|.|.|..........|:..:..:..:|..:|::||.:|:.
  Fly   358 VFSQVVKVIAALGVFLGYPIQFFVMIKILWPPLKRSNNCTQKYPITSQVCLRFFMVMMTFGVALV 422

  Fly   390 IPNLELFISLFGALCLSALGLAFPALIQICTHWYNTKGFAKVWLVLSNFVLIIVGILGLVIGTYT 454
            :|.|.|||||.||||.:.|....|.||...|.....|... ||..:.|.:::.|.:||:|.|||.
  Fly   423 VPKLNLFISLIGALCSTCLAFVIPVLIDFVTRAQVPKALG-VWSYIKNILILTVAVLGIVTGTYQ 486

  Fly   455 SLKEIVLTF 463
            |:.|||..|
  Fly   487 SIVEIVKEF 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:294310 133/406 (33%)
SdaC 62..456 CDD:223884 131/398 (33%)
CG4991NP_001259638.1 SLC5-6-like_sbd 82..489 CDD:294310 136/410 (33%)
SdaC 84..488 CDD:223884 134/407 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468302
Domainoid 1 1.000 157 1.000 Domainoid score I1306
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1622
Isobase 1 0.950 - 0 Normalized mean entropy S4217
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm1178
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
109.950

Return to query results.
Submit another query.