DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7888 and Y4C6B.2

DIOPT Version :9

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001370721.1 Gene:Y4C6B.2 / 189355 WormBaseID:WBGene00021156 Length:484 Species:Caenorhabditis elegans


Alignment Length:462 Identity:93/462 - (20%)
Similarity:201/462 - (43%) Gaps:91/462 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VEHPTTNSE------TLFHLLKGSLGTGILAMPNAFRNSGYITGSIGTIVIGFICTF-------- 99
            ::.|..|.:      |...::..:.|.|::|:|.|..::|.:||:...:|...:||:        
 Worm     1 MDQPHINEKGMSILVTALFIVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYTGILLAEN 65

  Fly   100 --CIHQLVKAQYELCRRKKMPSMNYPMVAETAMGEGPKCFRVFAPYIGTVVNTFLLIYQLGTCCV 162
              .:.:|.....:.||:.      ||     |||     .|...|.....|:..|.:.|.||..|
 Worm    66 WTILQELYPEYRDHCRKP------YP-----AMG-----LRAIGPKFAHFVSAMLQVTQFGTAVV 114

  Fly   163 YVVFVASNIKAIVDAVADTSIDVRLCMIIILLPLILINWV-----RNLKY--LAPFSTLANAITM 220
            :|:..|.|.:.::.|...|  .|..|.:|:::.|::..:.     ::..|  :|...:...::.:
 Worm   115 FVLLAAKNGENMLHANFGT--HVSFCYMILIVGLLVFPFTLPKSPKDFWYAVVAAMISTTISVVL 177

  Fly   221 VSFGI-----ICYYIFREPVTTEGKDAFGKPSNFP---LFFGTVLFALEAIGVILPLENEMKTPQ 277
            :.||.     :|:           |:.|....||.   :.|||::|:.........::::||.|.
 Worm   178 IIFGTVQDYEVCH-----------KEVFYPSFNFSKTLMSFGTIMFSYGGHCAFPTIQHDMKKPH 231

  Fly   278 KFGGSCGVLNVSMVLIVFLYVGMGLFGYLNYGSAVLGSITLNMPEHEVLSMCVKGMLAFAIYITH 342
            .|..|   :.::.::|...|:.:.:.||..|||::..||   :|..:.:::.....:..::::: 
 Worm   232 HFSRS---IIIAFIIIFIFYLPVSMSGYFVYGSSLTDSI---IPSIQNINIQTIVNILISLHVS- 289

  Fly   343 GLACYVAIDITWN--DYVAKRLGAQRNALFWEYAVRTGLVLITFL-LAVAIPNLELFISLFGALC 404
                 :|:.||:|  :...:.:....:...|:..|...||:::.: :|.::||..:.:.|.|...
 Worm   290 -----LALTITFNPLNQEFEEILNMSHDFGWQRIVARALVMLSVVFVAESVPNFGVLLDLVGGST 349

  Fly   405 LSALGLAFP-----ALIQICTHWYNTKGFAKVWL-----------VLSNFVLIIVGILGLVIGTY 453
            ::.:.|..|     ||..|.....|.....|:.:           :|:|.::::..|.|.|..|.
 Worm   350 ITMMALVVPIVFNLALTTIKKKKENKDNEEKLTIKEIFQNSDKIKLLANILILVFAIFGGVAATT 414

  Fly   454 TSLKEIV 460
            ::::.::
 Worm   415 SAMQTML 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:294310 92/451 (20%)
SdaC 62..456 CDD:223884 90/437 (21%)
Y4C6B.2NP_001370721.1 SLC5-6-like_sbd 9..368 CDD:382020 82/399 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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