DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7888 and R02F2.8

DIOPT Version :9

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_498173.1 Gene:R02F2.8 / 187530 WormBaseID:WBGene00019837 Length:494 Species:Caenorhabditis elegans


Alignment Length:475 Identity:101/475 - (21%)
Similarity:189/475 - (39%) Gaps:105/475 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DVEHPT--TNSETL------FHLLKGSLGTGILAMPNAFRNSGYITGSIGTIVIGFICTFCIHQL 104
            |.:.||  ||.:.:      ..::..:.|.|::|:..|..:.|.|.|    :::..:|:  |..|
 Worm    11 DKDGPTSHTNEKGIGWIIGAIFIIGETAGGGMIALSYALTSMGLIPG----LILLSLCS--IFSL 69

  Fly   105 VKAQYELCRRKKMPSMNYPMVAETAMGE-GPKCFRVFAPYIGTVVNTFLLIYQLGTCCVYVVFVA 168
            ..| .|||...|:....:|...:..... |...:|.....:.:.:...:.|.|:|...|.|:..|
 Worm    70 YTA-LELCWTWKIMQNRWPEYRDHCRKPYGEMAYRTIGRKMRSFIAFMICITQIGFATVLVLLAA 133

  Fly   169 SNIKAIVDAVADTSIDVRLCMIII----------LLPLILINWVRNLKYLAPFSTLANAITMVSF 223
            .|:..::...  .|:|:..|.:|:          :||..:..|...| :.|..||.  |:.:|..
 Worm   134 KNLSILLHFF--FSLDINQCYLILIVGLAVWPATMLPSPMHFWQAAL-FSAGSSTC--AVILVVV 193

  Fly   224 GI-----ICYYIFREPVTTEGKDAFGKPSNFP------LFFGTVLFALEAIGVILPLENEMKTPQ 277
            |:     :|           .:||   |...|      :.|||.:||......:..::::||.|.
 Worm   194 GLAHDAPVC-----------AQDA---PHEEPNLLKAFMAFGTFVFAFGGHATLPTIQHDMKKPA 244

  Fly   278 KFGGSCGVLNVSMVLIVFLYVGMGLFGYLNYGS----AVLGSITLNMPEHEVLSMCVKGMLAFAI 338
            .|..|   :.::::....||:.:.:.||..|||    |::.|:.:...:..|       .|..|:
 Worm   245 HFVHS---VVLAIIFCTMLYMCIAVGGYFVYGSTVGEAIIPSLQIKWIQQTV-------NLMIAV 299

  Fly   339 YITHGLACYVAIDITWNDYVAK---RLGAQRNALFWEYAVRTGLVLITFLLAVAIPNLELFISLF 400
            ::...:...::..|...:.:.|   :.|.:|      :.||:.|......:.::||:....:.|.
 Worm   300 HVITTIVIVMSPPIQQVEQLLKVPHKFGVKR------FLVRSILFWFVIFIGLSIPHFGPVLDLI 358

  Fly   401 GALCLSALGLAFPALIQICTH-----WY--NTKGFA------------------KVWLVLSNFVL 440
            ||..:..:.|..|.:..:...     |.  |.|..|                  |:.|.| |..:
 Worm   359 GASTMVLMTLILPPIFYLSIRTQEIIWLQGNEKSDAAEPTHERATFKEILRLTPKLILAL-NAAV 422

  Fly   441 IIVGILGLVIGTYTSLKEIV 460
            :|.||:|..:.|.||:..:|
 Worm   423 LIFGIIGGTLSTVTSVIRLV 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:294310 96/463 (21%)
SdaC 62..456 CDD:223884 94/447 (21%)
R02F2.8NP_498173.1 Aa_trans 22..416 CDD:279788 85/435 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166188
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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