DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7888 and R02F2.8

DIOPT Version :10

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_498173.1 Gene:R02F2.8 / 187530 WormBaseID:WBGene00019837 Length:494 Species:Caenorhabditis elegans


Alignment Length:475 Identity:101/475 - (21%)
Similarity:189/475 - (39%) Gaps:105/475 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DVEHPT--TNSETL------FHLLKGSLGTGILAMPNAFRNSGYITGSIGTIVIGFICTFCIHQL 104
            |.:.||  ||.:.:      ..::..:.|.|::|:..|..:.|.|.|    :::..:|:  |..|
 Worm    11 DKDGPTSHTNEKGIGWIIGAIFIIGETAGGGMIALSYALTSMGLIPG----LILLSLCS--IFSL 69

  Fly   105 VKAQYELCRRKKMPSMNYPMVAETAMGE-GPKCFRVFAPYIGTVVNTFLLIYQLGTCCVYVVFVA 168
            ..| .|||...|:....:|...:..... |...:|.....:.:.:...:.|.|:|...|.|:..|
 Worm    70 YTA-LELCWTWKIMQNRWPEYRDHCRKPYGEMAYRTIGRKMRSFIAFMICITQIGFATVLVLLAA 133

  Fly   169 SNIKAIVDAVADTSIDVRLCMIII----------LLPLILINWVRNLKYLAPFSTLANAITMVSF 223
            .|:..::...  .|:|:..|.:|:          :||..:..|...| :.|..||.  |:.:|..
 Worm   134 KNLSILLHFF--FSLDINQCYLILIVGLAVWPATMLPSPMHFWQAAL-FSAGSSTC--AVILVVV 193

  Fly   224 GI-----ICYYIFREPVTTEGKDAFGKPSNFP------LFFGTVLFALEAIGVILPLENEMKTPQ 277
            |:     :|           .:||   |...|      :.|||.:||......:..::::||.|.
 Worm   194 GLAHDAPVC-----------AQDA---PHEEPNLLKAFMAFGTFVFAFGGHATLPTIQHDMKKPA 244

  Fly   278 KFGGSCGVLNVSMVLIVFLYVGMGLFGYLNYGS----AVLGSITLNMPEHEVLSMCVKGMLAFAI 338
            .|..|   :.::::....||:.:.:.||..|||    |::.|:.:...:..|       .|..|:
 Worm   245 HFVHS---VVLAIIFCTMLYMCIAVGGYFVYGSTVGEAIIPSLQIKWIQQTV-------NLMIAV 299

  Fly   339 YITHGLACYVAIDITWNDYVAK---RLGAQRNALFWEYAVRTGLVLITFLLAVAIPNLELFISLF 400
            ::...:...::..|...:.:.|   :.|.:|      :.||:.|......:.::||:....:.|.
 Worm   300 HVITTIVIVMSPPIQQVEQLLKVPHKFGVKR------FLVRSILFWFVIFIGLSIPHFGPVLDLI 358

  Fly   401 GALCLSALGLAFPALIQICTH-----WY--NTKGFA------------------KVWLVLSNFVL 440
            ||..:..:.|..|.:..:...     |.  |.|..|                  |:.|.| |..:
 Worm   359 GASTMVLMTLILPPIFYLSIRTQEIIWLQGNEKSDAAEPTHERATFKEILRLTPKLILAL-NAAV 422

  Fly   441 IIVGILGLVIGTYTSLKEIV 460
            :|.||:|..:.|.||:..:|
 Worm   423 LIFGIIGGTLSTVTSVIRLV 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:444915 96/463 (21%)
R02F2.8NP_498173.1 Aa_trans 22..416 CDD:279788 85/435 (20%)

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