DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7888 and Y18D10A.23

DIOPT Version :9

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_493251.1 Gene:Y18D10A.23 / 173155 WormBaseID:WBGene00012487 Length:503 Species:Caenorhabditis elegans


Alignment Length:494 Identity:100/494 - (20%)
Similarity:198/494 - (40%) Gaps:126/494 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HRDVEHPT--TNSETLFH-------------LLKGSLGTGILAMPNAFRNSGYITGSIGTIVIGF 95
            |:..|:.|  |:|.:.:|             ::...:|.|::::|.|...||.|.|.:..::...
 Worm    17 HKVSENSTVSTDSSSTYHNSHGISWLMAAVFIVGDMMGAGMISLPLALGRSGLIAGCVLILLASI 81

  Fly    96 ICTFCIHQLVKAQYEL-----------CRRKKMPSMNYPMVAETAMGEGPKCFRVFAPYIGTVVN 149
            ...:...||.: .:|:           |||.      ||.:|..|:|.          :...||.
 Worm    82 FSGYTGIQLGE-NWEMMQIRWPKYRTHCRRP------YPEMAYRALGN----------WARQVVA 129

  Fly   150 TFLLIYQLGTCCVYVVFVASNIKAIVDAVADTSIDVRLCMIIILLPLILINWVRNLKYLAPFSTL 214
            ..|::.|....||.::..|.|...:::......:|  .|:.|:.:.|:|  |        |||.|
 Worm   130 VCLVVSQFLIACVLLLISAENFTNLLNTFFHLHLD--FCVFIVAIALVL--W--------PFSLL 182

  Fly   215 ANAI------------TMVSFGIICY---------YIFREPVTTEGKDAFGKPSNFPLFFGTVLF 258
            .:.:            :.::.|:|.:         ..:|:..:.|.|       .|.|.:||::|
 Worm   183 QSPMDFWQLAVISAVSSTIAAGLIVFGASWDMTSCVPYRQMPSLEAK-------QFTLAYGTIVF 240

  Fly   259 ALEAIGVILPLENEMKTPQKFGGSCGVLNVSMVLIVFLYVGMGLFGYLNYGSA----VLGSITLN 319
            |....|....::::|..|.:|..|  |:: |.:||..:|:.:.:.|.:.||.:    |:.||.|.
 Worm   241 AFGGHGAFPTIQHDMAMPHQFNKS--VIS-SYILITLVYLAVSITGLIAYGDSMIDTVIPSIQLT 302

  Fly   320 MPEHEVLSMCVKGMLAFAIYITHGLACYVAIDITWNDYVAKRLGAQRNALFWEYAVRTGLVLITF 384
            .....:..:....:|...|.:...|:..|.   .|.. :..:.|.:|      ..|||.::.:..
 Worm   303 WVAQTINILITAHILPTIIIVLSPLSQQVE---EWIK-IPNQFGCRR------VLVRTFILFLVM 357

  Fly   385 LLAVAIPNLELFISLFGALCLSALGLAFPAL--------------------IQICTHWYNTKGFA 429
            ..|:::..|.||:.|.||..::.:.:..|::                    ||..:....|...|
 Worm   358 FTALSVLKLGLFLDLVGATTITLMTMLLPSIFWLFMQASAKKREDGLKAGTIQQNSPDVETATLA 422

  Fly   430 KVW------LVLSNFVLIIVGILGLVIGTYTSLKEIVLT 462
            .||      |:..|.:.:..|:||.:...:::::.::::
 Worm   423 DVWYYTPKLLLAFNCISLTFGLLGGLTSAFSAIEALIIS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:294310 98/478 (21%)
SdaC 62..456 CDD:223884 94/455 (21%)
Y18D10A.23NP_493251.1 SLC5-6-like_sbd 37..391 CDD:382020 83/402 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166193
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.