DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7888 and Slc38a1

DIOPT Version :9

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_620187.1 Gene:Slc38a1 / 170567 RGDID:69645 Length:485 Species:Rattus norvegicus


Alignment Length:489 Identity:102/489 - (20%)
Similarity:190/489 - (38%) Gaps:109/489 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KNGHSNSAYVADHPDKLELAEKGQKNKAVVAKDPDYNPYHHRDVEHPTTNSETLFHLLKGSLGTG 70
            :||..||.:::|...:..|.....:.:    |..:|.|       ..|:...::|:|....:|:|
  Rat    35 ENGQINSKFISDRESRRSLTNSHLEKR----KCDEYIP-------GTTSLGMSVFNLSNAIMGSG 88

  Fly    71 ILAMPNAFRNSGYITGSIGTIVIGFICTFCIHQLVKAQYELCRRKKMPSMNYPMVAETAMGEGPK 135
            ||.:..|..|:|.:...|....:..:..:.|:.|:     :| .|:...|.|..:.|...|...|
  Rat    89 ILGLAFALANTGILLFLILLTSVTLLSIYSINLLL-----IC-SKETGCMVYEKLGEQVFGTTGK 147

  Fly   136 CFRVFAPYIGTVVNTFLLIYQLGTCCVYVVFVASNIKAIVDAVADTS-------IDVRLCMII-- 191
                      .|:.....:...|....|:..|.:.:.:.:.::....       :|.|:.:::  
  Rat   148 ----------LVIFGATSLQNTGAMLSYLFIVKNELPSAIKSLMGEEETFSAWYVDGRVLVVMVT 202

  Fly   192 --ILLPLILINWVRNLKYLAPFSTLANAITMVSFGIICYYIFREP-------------------- 234
              |:|||.|:   :||.||...|..:.:..:....::.|..|:.|                    
  Rat   203 FGIILPLCLL---KNLGYLGYTSGFSLSCMVFFLIVVIYKKFQIPCMNGEQNSTVSANVTDACTP 264

  Fly   235 --VTTEGKDAFGKPSNFPLFFGTVLFALEAIGVILPLENEMK--TPQKFGGSCGVLNVSMVLIVF 295
              ||...|..:..|        |:.||......:||:.:|:|  :.:|..   .|.|:|...:..
  Rat   265 KYVTFNSKTVYALP--------TIAFAFVCHPSVLPIYSELKDRSQKKMQ---MVSNISFFAMFV 318

  Fly   296 LYVGMGLFGYLNYGSAVLGSITLNMPEHEVLSMCVKGMLAFAIYITHGLACYVAIDITWNDYVAK 360
            :|....:||||.:...|...:.     |:..|      ....:.:|..||..||:.:|    |..
  Rat   319 MYFLTAIFGYLTFYEKVQSDLL-----HKYQS------TGDILILTVRLAVIVAVILT----VPV 368

  Fly   361 RLGAQRNALFWEYAVRTGL-----VLITFLLAVAIPNLELFI----SLFGALCLSALGL---AFP 413
            .....|::|| |.|.:|..     ||:|.:|.|.|..|.:||    .:||.:.:::..:   ..|
  Rat   369 LFFTVRSSLF-ELAKKTKFHLCRHVLVTIILLVIINLLVIFIPSMKDIFGVVGVTSANMLIFILP 432

  Fly   414 ALIQI-CTHWYNTKGFAKVWLVLSNFVLIIVGIL 446
            :.:.: .|:....|...::|..|    .:.:|:|
  Rat   433 SSLYLKITNQDGDKNTQRIWAAL----FLALGVL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:294310 93/444 (21%)
SdaC 62..456 CDD:223884 91/433 (21%)
Slc38a1NP_620187.1 SLC5-6-like_sbd 69..472 CDD:382020 93/444 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352629
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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