DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7888 and Slc38a1

DIOPT Version :10

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_620187.1 Gene:Slc38a1 / 170567 RGDID:69645 Length:485 Species:Rattus norvegicus


Alignment Length:489 Identity:102/489 - (20%)
Similarity:190/489 - (38%) Gaps:109/489 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KNGHSNSAYVADHPDKLELAEKGQKNKAVVAKDPDYNPYHHRDVEHPTTNSETLFHLLKGSLGTG 70
            :||..||.:::|...:..|.....:.:    |..:|.|       ..|:...::|:|....:|:|
  Rat    35 ENGQINSKFISDRESRRSLTNSHLEKR----KCDEYIP-------GTTSLGMSVFNLSNAIMGSG 88

  Fly    71 ILAMPNAFRNSGYITGSIGTIVIGFICTFCIHQLVKAQYELCRRKKMPSMNYPMVAETAMGEGPK 135
            ||.:..|..|:|.:...|....:..:..:.|:.|:     :| .|:...|.|..:.|...|...|
  Rat    89 ILGLAFALANTGILLFLILLTSVTLLSIYSINLLL-----IC-SKETGCMVYEKLGEQVFGTTGK 147

  Fly   136 CFRVFAPYIGTVVNTFLLIYQLGTCCVYVVFVASNIKAIVDAVADTS-------IDVRLCMII-- 191
                      .|:.....:...|....|:..|.:.:.:.:.::....       :|.|:.:::  
  Rat   148 ----------LVIFGATSLQNTGAMLSYLFIVKNELPSAIKSLMGEEETFSAWYVDGRVLVVMVT 202

  Fly   192 --ILLPLILINWVRNLKYLAPFSTLANAITMVSFGIICYYIFREP-------------------- 234
              |:|||.|:   :||.||...|..:.:..:....::.|..|:.|                    
  Rat   203 FGIILPLCLL---KNLGYLGYTSGFSLSCMVFFLIVVIYKKFQIPCMNGEQNSTVSANVTDACTP 264

  Fly   235 --VTTEGKDAFGKPSNFPLFFGTVLFALEAIGVILPLENEMK--TPQKFGGSCGVLNVSMVLIVF 295
              ||...|..:..|        |:.||......:||:.:|:|  :.:|..   .|.|:|...:..
  Rat   265 KYVTFNSKTVYALP--------TIAFAFVCHPSVLPIYSELKDRSQKKMQ---MVSNISFFAMFV 318

  Fly   296 LYVGMGLFGYLNYGSAVLGSITLNMPEHEVLSMCVKGMLAFAIYITHGLACYVAIDITWNDYVAK 360
            :|....:||||.:...|...:.     |:..|      ....:.:|..||..||:.:|    |..
  Rat   319 MYFLTAIFGYLTFYEKVQSDLL-----HKYQS------TGDILILTVRLAVIVAVILT----VPV 368

  Fly   361 RLGAQRNALFWEYAVRTGL-----VLITFLLAVAIPNLELFI----SLFGALCLSALGL---AFP 413
            .....|::|| |.|.:|..     ||:|.:|.|.|..|.:||    .:||.:.:::..:   ..|
  Rat   369 LFFTVRSSLF-ELAKKTKFHLCRHVLVTIILLVIINLLVIFIPSMKDIFGVVGVTSANMLIFILP 432

  Fly   414 ALIQI-CTHWYNTKGFAKVWLVLSNFVLIIVGIL 446
            :.:.: .|:....|...::|..|    .:.:|:|
  Rat   433 SSLYLKITNQDGDKNTQRIWAAL----FLALGVL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:444915 93/444 (21%)
Slc38a1NP_620187.1 SLC5-6-like_sbd 69..472 CDD:444915 93/444 (21%)

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