DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7888 and slc38a8a

DIOPT Version :9

Sequence 1:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001138287.1 Gene:slc38a8a / 100004247 ZFINID:ZDB-GENE-121005-5 Length:441 Species:Danio rerio


Alignment Length:440 Identity:100/440 - (22%)
Similarity:180/440 - (40%) Gaps:92/440 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LFHLLKGSLGTGILAMPNAFRNSGYITGSIGTIVIGFICTFCIHQLVKAQYELCRRKKMPSMN-Y 122
            :|.:||.:||.|:|..|.||..:|.|..::...:|..:  |.|..||...|.    ..:...| |
Zfish    30 VFIMLKSALGAGLLIFPWAFAKAGGIHFAVTVEMISLV--FLISGLVILGYS----SSVSGRNTY 88

  Fly   123 PMVAETAMGE--GPKC-----FRVFAPYIGTVVNTFLLIY--QLGTCCVYVVFVASNIKAIVDAV 178
            ..|.....|.  |..|     |.:|  :|..   .||:|.  ||...|:       ::..::..:
Zfish    89 QGVVTDICGPAIGKLCEICYVFNLF--FISV---AFLVIVADQLHKLCL-------SMYELITGL 141

  Fly   179 ADTSI------DVR-----LCMIIILLPLILINWVRNLKYLAPFSTLANAITMVSFGIICYYIFR 232
            .::.:      |.|     ||::.| .||.:...:...||.:...|.|.|...|:  |:..|..|
Zfish   142 PESEMPYHWYTDQRFALFLLCLLFI-FPLSVPKEISIQKYTSVLGTFAAAYLTVA--IVVKYHMR 203

  Fly   233 -------EPVTTEGKDAFGKPSNFPLFFGTVLFALE----AIGVILPLENEMKTPQKFGGSCGVL 286
                   .|:.:.|..::  .|.|.: ..|:.|..:    .:.|...:||...:...|     :.
Zfish   204 PIHEINLSPLYSSGISSW--DSVFSV-IPTICFGFQCHEACVAVYSSMENRRLSHWVF-----IS 260

  Fly   287 NVSMVLIVFLYVGMGLFGYLNYGSAVLGSITLNMPEHEVLSMCVKGMLAFAIYITHGLACYVAID 351
            .:||::.:.:|...|:||||.:|..|...|.::....:|..:..:.:...:|...:.:...:...
Zfish   261 VLSMLICLLIYSLTGVFGYLTFGKNVAPDILMSYSGGDVTMIVARLLFGISIITIYPIIVLLGRS 325

  Fly   352 ITWNDYVAKRLGAQRNALFWEY------AVRTGLVLITFLLAVAIPNLELFISLFGALCLSALGL 410
            :..:..:.:||  :..|:...|      |:.|..|.:|.|:||.||::...||:.|.  :||..:
Zfish   326 VIQDPLLRRRL--KHTAVTESYESRTRVALTTAWVTVTLLIAVFIPDISKVISVVGG--VSAFFI 386

  Fly   411 -AFPALIQICTHWYNTKGFAKVWLVLS-------NFVLIIVGILGLVIGT 452
             .||             |...:::|.|       .::|:..|::.|:.||
Zfish   387 FIFP-------------GLCLIFVVQSESVSPTMRYLLVTWGMITLLCGT 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:294310 100/440 (23%)
SdaC 62..456 CDD:223884 99/437 (23%)
slc38a8aNP_001138287.1 SdaC 17..435 CDD:223884 100/440 (23%)
SLC5-6-like_sbd 29..435 CDD:294310 100/440 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594499
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.