DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43693 and LAX2

DIOPT Version :9

Sequence 1:NP_001261694.1 Gene:CG43693 / 39231 FlyBaseID:FBgn0263776 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_179701.1 Gene:LAX2 / 816640 AraportID:AT2G21050 Length:483 Species:Arabidopsis thaliana


Alignment Length:520 Identity:113/520 - (21%)
Similarity:192/520 - (36%) Gaps:131/520 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 TVTAG-YGENEKPKGGKGGQSKFIRSDMADVPVQQAAGSTLPLVISRKKGDDSEDGNYNPFEHRK 155
            ||..| |.|.|     |.|::..|:|.::|:                                  
plant    10 TVVVGNYVEME-----KDGKALDIKSKLSDM---------------------------------- 35

  Fly   156 VEHPTSDLETFVHLLKGSLGSGILAMPMAFSHAGLWFGLVATFAVGTLCTYCVHILVKCAHILCR 220
            ..|..|..:.:.......:...:|.:|.:||..|:..|::.....|.|.::..: |:...::..|
plant    36 FWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAY-LISILYVEYR 99

  Fly   221 RRK-IPMMGFADVAEQAF--LDGPPALNRWSRFIRFMVN-TFL----VIDLLGCCCIYLVFVATN 277
            .|| ...:.|.:...|.|  |||  .|.:..|.:....| |||    ||.|:.|        |:|
plant   100 TRKEREKVNFRNHVIQWFEVLDG--LLGKHWRNVGLAFNCTFLLFGSVIQLIAC--------ASN 154

  Fly   278 VEQVVRVYMETELSIRVWIMI---VTAPLIFMCLVRNLKFLTPFSMIANILMFVGIVIT-----F 334
            :     .|:...|..|.|..|   ..|..:|:....|.:          |..|:|:::|     :
plant   155 I-----YYINDNLDKRTWTYIFGACCATTVFIPSFHNYR----------IWSFLGLLMTTYTAWY 204

  Fly   335 IYMFSDIPAPVERPGIVSVTEWPLFF---GTVIFALEGIGVVMSLENDMKNPSHFIGCPSVLNFG 396
            :.:.|.:...||.......::..|:|   ..:::...|..|.:.:.:.|..|..|   .|:..|.
plant   205 LTIASILHGQVEGVKHSGPSKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKF---KSIYLFA 266

  Fly   397 MGLVIALYTLVGFFGFLKYGPETQA------SITLN-------LPLEDKLAQSVKLMIAIAIFFT 448
            ...|:.| ||          |...|      .:.||       ||.......:|.||: |..|.|
plant   267 TLYVLTL-TL----------PSASAVYWAFGDLLLNHSNAFALLPKNLYRDFAVVLML-IHQFIT 319

  Fly   449 FTLQFYVPVTILWKGL--EHKIRPEKQNISEYGLRVFLVLLCGGIAVALPNLGPFISLIGAVCLS 511
            |... ..|:..:|:.|  .|:.|   ........|:.:|:....:|:..|..||..|.:|::.:|
plant   320 FGFA-CTPLYFVWEKLIGMHECR---SMCKRAAARLPVVIPIWFLAIIFPFFGPINSTVGSLLVS 380

  Fly   512 TLGMIVPATIELAVYH---------EDPG--YGRFNWRLWKNSGLILF-GVVGFVAGTYVSIIEF 564
            ....|:||...:..:.         |.|.  .||:......|:.:::: .:|||..|.:.|:|.|
plant   381 FTVYIIPALAHIFTFRSSAARENAVEQPPRFLGRWTGAFTINAFIVVWVFIVGFGFGGWASMINF 445

  Fly   565  564
            plant   446  445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43693NP_001261694.1 SdaC 153..561 CDD:223884 99/453 (22%)
SLC5-6-like_sbd 158..562 CDD:294310 100/449 (22%)
LAX2NP_179701.1 PLN03074 2..461 CDD:215559 113/520 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.