DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43693 and Slc38a3

DIOPT Version :9

Sequence 1:NP_001261694.1 Gene:CG43693 / 39231 FlyBaseID:FBgn0263776 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001186146.1 Gene:Slc38a3 / 76257 MGIID:1923507 Length:505 Species:Mus musculus


Alignment Length:478 Identity:97/478 - (20%)
Similarity:184/478 - (38%) Gaps:109/478 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 SEDGNYNPFEHRKVEHPTSDLETFVHLLKGSLGSGILAMPMAFSHAGLWFGLVATFAVGTLCTYC 207
            |::.::..||.:     ||...:..:|....:|||||.:..|.::.|:...|....||..|.:|.
Mouse    53 SKEPHFTDFEGK-----TSFGMSVFNLSNAIMGSGILGLAYAMANTGIILFLFLLTAVALLSSYS 112

  Fly   208 VHILVKCAHILCRRRKIPMMGFADVAEQAFLDGPPALNRWSRFIRFMVNTFLVIDLLGCCCIYLV 272
            :|:|:|.:.|      :.:..:..:..:||  |.|.        :......:.:..:|....||.
Mouse   113 IHLLLKSSGI------VGIRAYEQLGYRAF--GTPG--------KLAAALAITLQNIGAMSSYLY 161

  Fly   273 FVATNVEQVVRVYMETELSIRVW-------IMIVTAPLIF-MCLVRNLKFL---TPFSMIANILM 326
            .:.:.:..|::.::..|....||       :::|:..:|. :.|:|.|.:|   :.||:...:..
Mouse   162 IIKSELPLVIQTFLNLEKPASVWYMDGNYLVILVSVTIILPLALMRQLGYLGYSSGFSLSCMVFF 226

  Fly   327 FVGIVITFIYMFSDIPAPVERPGIVSVTE--------------------------WPLFF----- 360
            .:.:    ||....:|.|:.. .:.:.|.                          .|.:|     
Mouse   227 LIAV----IYKKFQVPCPLAH-NLANATGNFSHMVVAEEKAQLQGEPDTAAEAFCTPSYFTLNSQ 286

  Fly   361 -----GTVIFALEGIGVVMSLENDMKNPS-----HFIGCPSVLNFGMGLVIALYTLVGFFGFLKY 415
                 ..:.||......|:.:..::|:||     |      :.|..:.::..:|.|...||:|.:
Mouse   287 TAYTIPIMAFAFVCHPEVLPIYTELKDPSKRKMQH------ISNLSIAVMYVMYFLAALFGYLTF 345

  Fly   416 --GPETQASITLNL--PLEDKLAQSVKLMIAIAIFFTFTLQFYVPVTI--LWKGLEHKIRPEKQN 474
              |.|::...|.:.  |. |.|...|::.:.||:..|      ||:.:  :.:.::..:   .||
Mouse   346 YDGVESELLHTYSKVDPF-DVLILCVRVAVLIAVTLT------VPIVLFPVRRAIQQML---FQN 400

  Fly   475 ISEYGLRVFLV----LLCGGIAVAL-PNLGPFISLIGAVCLSTLGMIVPATIELAVYHEDPGYGR 534
            .....||..|:    |.|..:.|.. ||:.....:|||.....|..|.||.....:...|....|
Mouse   401 QEFSWLRHVLIATGLLTCINLLVIFAPNILGIFGIIGATSAPCLIFIFPAIFYFRIMPTDKEPAR 465

  Fly   535 FNWRLWKNSGLILFGVVGFVAGT 557
            ...::.    .:.|..|||:..|
Mouse   466 STPKIL----ALCFAAVGFLLMT 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43693NP_001261694.1 SdaC 153..561 CDD:223884 94/468 (20%)
SLC5-6-like_sbd 158..562 CDD:294310 94/463 (20%)
Slc38a3NP_001186146.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..48
Aa_trans 63..492 CDD:279788 94/468 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.