DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43693 and slc36a4

DIOPT Version :9

Sequence 1:NP_001261694.1 Gene:CG43693 / 39231 FlyBaseID:FBgn0263776 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_002940192.3 Gene:slc36a4 / 100493349 XenbaseID:XB-GENE-994062 Length:523 Species:Xenopus tropicalis


Alignment Length:493 Identity:169/493 - (34%)
Similarity:274/493 - (55%) Gaps:48/493 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 ENEKPKGGKGGQSKFIRSDMADVPVQQAAGST-----LPLVISRKKGDDSED-GNYNPFEHRKVE 157
            :||....||..:.|:.:..:     |.|...|     .||:   :..|||:. |:.:.:..|:..
 Frog    23 KNEDSFDGKYAEKKYSQRHL-----QHAESRTDKEVMKPLI---ENEDDSDGFGDEHQYLQRRQH 79

  Fly   158 HPTSD----LETFVHLLKGSLGSGILAMPMAFSHAGLWFGLVATFAVGTLCTYCVHILVKCAHIL 218
            ..:.|    .:|.:|||||::|:|:|.:|:|..:|||..|.::....|.:..:|::|||:|:|.|
 Frog    80 SDSKDGLTFFQTLIHLLKGNIGTGLLGLPLAIKNAGLLLGPISLLFFGIISIHCMNILVRCSHFL 144

  Fly   219 CRRRKIPMMGFADVAEQAFLDGPPA-LNRWSRFIRFMVNTFLVIDLLGCCCIYLVFVATNVEQVV 282
            |:|.|...:|:::....|...||.. |.|.:.|.|.||:.|||:..||.|.:|.||:|.|::||:
 Frog   145 CQRYKKANLGYSETVGLALEVGPSGFLQRRASFGRSMVDWFLVVTQLGFCSVYFVFLAENIKQVL 209

  Fly   283 RVYMETE-----------LSIRVWI---MIVTAPLIFMCLVRNLKFLTPFSMIANILMFVGIVIT 333
            .|::.|:           |.:|:::   :.:..||:|   :|:||.|:..|.:||:.|.:.::|.
 Frog   210 EVFLATKLQQPGIGGIWTLDLRIYMFSFLPLIIPLVF---IRDLKNLSLLSFLANLSMAISLIIV 271

  Fly   334 FIYMFSDIPAPVERPGIVSVTEWPLFFGTVIFALEGIGVVMSLENDMKNPSHFIGCPSVLNFGMG 398
            :.|:..::..|...|...|...:||||||.|||.||||||:.|||.|::...|   ...||.||.
 Frog   272 YQYVIRNLSDPRALPLGTSWKTYPLFFGTAIFAFEGIGVVLPLENRMRDKKDF---SKALNIGMA 333

  Fly   399 LVIALYTLVGFFGFLKYGPETQASITLNLPLEDKLAQSVKLMIAIAIFFTFTLQFYVPVTILWKG 463
            :|.|||..:...|:..:|.:.:.|||||||.:..|.|.||::.:..|:.|:.:|:|||..|:...
 Frog   334 IVTALYISLATLGYFCFGDQIKGSITLNLPQDSWLYQVVKILYSFGIYVTYAIQYYVPAEIILPA 398

  Fly   464 LEHKIRPEKQNISEYGLRVFLVLLCGGIAVALPNLGPFISLIGAVCLSTLGMIVPATIELAVY-- 526
            :..:::..::.:.|:.:|.|||.|....||.:|.|...||.:|||..|||.:|:|..:|:..:  
 Frog   399 VTSRVQKTRKLLCEFTMRFFLVCLTCAFAVLIPRLDLVISFVGAVSSSTLALILPPLVEIITFQK 463

  Fly   527 -HEDPGYGRFNWRLWKNSGLILFGVVGFVAGTYVSIIE 563
             |..|      |.:.|:..:...|.|||:|||||:|.|
 Frog   464 EHLSP------WVIAKDIAIAAIGFVGFLAGTYVTIEE 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43693NP_001261694.1 SdaC 153..561 CDD:223884 153/429 (36%)
SLC5-6-like_sbd 158..562 CDD:294310 152/425 (36%)
slc36a4XP_002940192.3 SLC5-6-like_sbd 84..493 CDD:382020 152/420 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 332 1.000 Domainoid score I1149
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 334 1.000 Inparanoid score I2364
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm9415
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R126
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

Return to query results.
Submit another query.