DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43693 and slc38a11

DIOPT Version :9

Sequence 1:NP_001261694.1 Gene:CG43693 / 39231 FlyBaseID:FBgn0263776 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_017952819.1 Gene:slc38a11 / 100487061 XenbaseID:XB-GENE-6045807 Length:391 Species:Xenopus tropicalis


Alignment Length:437 Identity:88/437 - (20%)
Similarity:159/437 - (36%) Gaps:121/437 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 AGLWFGLVATFAVGTLCTYCVHILVKCAHILCRRRKIPMMG---FADVAEQAFLDGPPALNRWSR 249
            ||...||:....|..:..|.:.:|:|..         .|.|   :..:..:.|  |.|.      
 Frog     4 AGFPLGLLLLIGVAYVTDYSMILLIKGG---------SMSGTNTYQSLVSKTF--GFPG------ 51

  Fly   250 FIRFMVNTFLVIDLLGCCCIYLVFVATNV-------EQVVRV--------YMETELSIRVWIMIV 299
                    :.::.:|.....:...::.|:       :.:.|:        |::..:.|.:...::
 Frog    52 --------YFLLSVLQFLYPFAAMISYNIVTGDILPKIIQRIPGVSHDSWYVDRHVVIVLSTAVI 108

  Fly   300 TAPLIFMCLVRNLKFLTPFSMIANILMFVGIVITFI---YMFSDIPAPVERPGIVSVTE--WPLF 359
            |.|:   .|.||::.|...|:::.:|.|..:||..:   .:.|:||.          ||  |...
 Frog   109 TLPI---ALYRNMEKLGKVSLLSLLLTFTVLVIIIVRATSLTSEIPH----------TEDAWDFA 160

  Fly   360 FGTVIFALEGIGVVM--------------SLEN-DMKNPSHFIGCPSVLNFGMGLVIALYTLVGF 409
            ...   |::.:||:.              |||. .:.|.|.......:|:..:.|..:::..|.|
 Frog   161 RSN---AMQAVGVMSFVFMCHHACFLIYGSLEKATVGNWSRITHVSMLLSLFISLQYSVFGYVSF 222

  Fly   410 FGFLKYGPETQASITLNLPLEDKLAQSVKLMIAIAIFFTFTLQFYVPVTILWKGLEHKIRPEKQN 474
            .||      ||..:..|...||.||...:...||.|..|:.::.:|...::            .|
 Frog   223 TGF------TQGDLFENYCREDNLATIGRFCYAITIILTYPMECFVAREVI------------SN 269

  Fly   475 ISEYG---------LRVFLVLLCGGIAVALPNLGPFISLIGAVCLSTLGMIVPATI-----ELAV 525
            :...|         :.|.:|.|...:::....||.|:.|.|.:..:.|..|:|...     |...
 Frog   270 VFFGGNLPYPLHLAVTVAIVSLTTAVSLVYDCLGMFLELNGVLSATPLVFIIPPACYLKQSEKPW 334

  Fly   526 YHEDPGYGRFNWRLWKNSGLILFGVVGFVAGTYVSIIEFHAEFSSGH 572
            ||.|......         ::|.|||...|| ::..|.:..|.|.|:
 Frog   335 YHLDNAMPLL---------ILLLGVVIMPAG-FIMAILYPQECSHGN 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43693NP_001261694.1 SdaC 153..561 CDD:223884 84/424 (20%)
SLC5-6-like_sbd 158..562 CDD:294310 84/425 (20%)
slc38a11XP_017952819.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.