DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43693 and slc38a8a

DIOPT Version :9

Sequence 1:NP_001261694.1 Gene:CG43693 / 39231 FlyBaseID:FBgn0263776 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001138287.1 Gene:slc38a8a / 100004247 ZFINID:ZDB-GENE-121005-5 Length:441 Species:Danio rerio


Alignment Length:488 Identity:104/488 - (21%)
Similarity:178/488 - (36%) Gaps:143/488 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 SDLET-----------FVHLLKGSLGSGILAMPMAFSHAG---------------LWFGLVA--- 196
            |.|||           |: :||.:||:|:|..|.||:.||               |..|||.   
Zfish    15 SSLETNEPRLGSLGAVFI-MLKSALGAGLLIFPWAFAKAGGIHFAVTVEMISLVFLISGLVILGY 78

  Fly   197 --------TF----------AVGTLCTYCVHILVKCAHILCRRRKIPMMGFADVAEQAFLDGPPA 243
                    |:          |:|.||..|.                                  .
Zfish    79 SSSVSGRNTYQGVVTDICGPAIGKLCEICY----------------------------------V 109

  Fly   244 LNRWSRFIRFMVNTFLVIDLLGCCCIYLVFVATNVEQVVRVYMETELSIRVWIMIVTAPLIFMCL 308
            .|.:...:.|:|   :|.|.|...|:.:..:.|.:.       |:|:... |.......|..:||
Zfish   110 FNLFFISVAFLV---IVADQLHKLCLSMYELITGLP-------ESEMPYH-WYTDQRFALFLLCL 163

  Fly   309 VRNLKFLTPFSMIANILM--FVGIVITFIYMFSDIP---------------APVERPGIVSVTEW 356
            :    |:.|.|:...|.:  :..::.||...:..:.               :|:...||.|   |
Zfish   164 L----FIFPLSVPKEISIQKYTSVLGTFAAAYLTVAIVVKYHMRPIHEINLSPLYSSGISS---W 221

  Fly   357 PLFFG---TVIFALE----GIGVVMSLENDMKNPSHFIGCPSVLNFGMGLVIALYTLVGFFGFLK 414
            ...|.   |:.|..:    .:.|..|:||  :..||::.. |||:  |.:.:.:|:|.|.||:|.
Zfish   222 DSVFSVIPTICFGFQCHEACVAVYSSMEN--RRLSHWVFI-SVLS--MLICLLIYSLTGVFGYLT 281

  Fly   415 YGPETQASITLNLPLEDKLAQSVKLMIAIAIFFTFTL-----QFYVPVTILWKGLEHKIRPEK-Q 473
            :|......|.::....|......:|:..|:|...:.:     :..:...:|.:.|:|....|. :
Zfish   282 FGKNVAPDILMSYSGGDVTMIVARLLFGISIITIYPIIVLLGRSVIQDPLLRRRLKHTAVTESYE 346

  Fly   474 NISEYGLRVFLVLLCGGIAVALPNLGPFISLIGAVCLSTLGMIVPATIELAVYHEDPGYGRFNWR 538
            :.:...|....|.:...|||.:|::...||::|.|....: .|.|....:.|...:.......:.
Zfish   347 SRTRVALTTAWVTVTLLIAVFIPDISKVISVVGGVSAFFI-FIFPGLCLIFVVQSESVSPTMRYL 410

  Fly   539 L--WKNSGLI--LFGVVGFVAGTYVSIIEFHAE 567
            |  |   |:|  |.|.:.|...|.|:|::...|
Zfish   411 LVTW---GMITLLCGTLIFGQSTSVAIMQLITE 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43693NP_001261694.1 SdaC 153..561 CDD:223884 102/480 (21%)
SLC5-6-like_sbd 158..562 CDD:294310 102/481 (21%)
slc38a8aNP_001138287.1 SdaC 17..435 CDD:223884 101/479 (21%)
SLC5-6-like_sbd 29..435 CDD:294310 98/467 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.