DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32079 and VGAT

DIOPT Version :9

Sequence 1:NP_729645.3 Gene:CG32079 / 39230 FlyBaseID:FBgn0052079 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster


Alignment Length:442 Identity:91/442 - (20%)
Similarity:175/442 - (39%) Gaps:97/442 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 MSDLEAFINVLKCGFGTGCLAMPYAFLNSG-WLVGLICTFALGFFVLYAMHILLHHINNLGVQHN 108
            :.:.:|..||.....|...:::|:|.|:.| |  .::....:.....|...:|:..:..      
  Fly   141 IDEFQAAWNVTNAIQGMFIVSLPFAVLHGGYW--AIVAMVGIAHICCYTGKVLVQCLYE------ 197

  Fly   109 MP------MISYRKAVELSIRK---GPSIFHFLSKPFGYLVDILLCAYHFGVDCVYVVFIAKSLK 164
             |      |:..|.:. ::|.|   ||.: ...:.....|:::|:       .|:..|.:.    
  Fly   198 -PDPATGQMVRVRDSY-VAIAKVCFGPKL-GARAVSIAQLIELLM-------TCILYVVVC---- 248

  Fly   165 HLGDMYLWVW-----DERLYMALIASPLILTFLIRNLKSLVPFS-------IISNILLLTGYCVI 217
              ||:....:     |.|.:|..:...|:....:::||.:...|       |:.|.::| |||::
  Fly   249 --GDLLAGTYPQGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVIL-GYCLL 310

  Fly   218 LNYLFRDLPE--FEHLHAIQPLRNFPIFFGTVLFSIESVGVILSLGRSM--RKPESLMGTCGVLN 278
                  .:.:  :..:.....:.||||..|.::||..|...:.:|..:|  |...:.|     |:
  Fly   311 ------QIGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWM-----LD 364

  Fly   279 QGMIVVISFYAVFGFFGYWRYGENTSNSILQNMPQNDILPKLATGIFALAIFF-------SYALQ 336
            ...|....|.|.||:..:..:..:|...|..|:.        :.|...:..||       ||.|.
  Fly   365 WSHIAAAVFKAGFGYICFLTFQNDTQQVITNNLH--------SQGFKGMVNFFLVIKALLSYPLP 421

  Fly   337 GYVTVDIIWRNYLE--PELE-------DRYLRTVECLLRIALVIASVLVAIQYPDFGLLLSLVGS 392
            .|...:::.||:..  |:.:       |..|:......|:.::::::|:||..|.|.:|:..:||
  Fly   422 YYAACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGS 486

  Fly   393 FCLAQLGLILPGIVDICLRYEEDYGPGKIF----LIRSMLFICMGLAGGVAG 440
            |....|..|.|....|.::       |.:.    :.:..|.|.:|:..||.|
  Fly   487 FTGTMLSFIWPCYFHIKIK-------GHLLDQKEIAKDYLIIGLGVLFGVIG 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32079NP_729645.3 SLC5-6-like_sbd 46..446 CDD:294310 91/441 (21%)
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 91/439 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468280
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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