DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klu and CG2712

DIOPT Version :9

Sequence 1:NP_001261690.1 Gene:klu / 39228 FlyBaseID:FBgn0013469 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_570028.1 Gene:CG2712 / 31267 FlyBaseID:FBgn0024975 Length:501 Species:Drosophila melanogaster


Alignment Length:557 Identity:98/557 - (17%)
Similarity:176/557 - (31%) Gaps:187/557 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 EDAEQDEDHDGSVPDEEDDSVDQDGDAGKYIKSEQPVSEDEENEQEMDQDIEDISGEDLELSHSD 253
            :|.|..|....::.|||...|.:..:|..  :.|.|:.::|..:..::|             |.|
  Fly   125 DDQEVTEYPAETIRDEEQLLVVESDEAES--RLEAPIVQEERLDIALEQ-------------HED 174

  Fly   254 D-----NDQDDSPRISMSPLQLQAAQSNLPQDQNQPMNKENPLHVDIKTEIPSPYDRYFPIPSPL 313
            |     :|.|                   |:.:...:.:..|                 .:..|:
  Fly   175 DLCEIVDDPD-------------------PEQRRSRLERSEP-----------------ALQCPI 203

  Fly   314 FGYYLHTKYLNEVFRRRHDLYPSPLQHTPSSIASETETSPNAQERKSSSNHVLPHALLANNSPPP 378
            .|        .::.|:|...|...|...|             :.|:..::|.:...|        
  Fly   204 CG--------KQLARKRTFQYHMRLHGQP-------------KIRQEDNDHCIEECL-------- 239

  Fly   379 SLPSPPRSESSVTNNVATTTTSSTTKKRSSPKPKGKKGEKKPMPPPQERPLDLCMRNEVEPKKYK 443
                                       :..|..:.|.||            |:   .|:..|..:
  Fly   240 ---------------------------QVEPVLQAKAGE------------DV---YEIVEKSAQ 262

  Fly   444 KSGSKSSLESRSAGMMPPPPALSAASSLESMSALSPASSSHSGHMPITSAATPNHQPPPNSPYAN 508
            .|.::.:|.|.|....|..|:|......:.:|    .::|...||.:...|||            
  Fly   263 TSATQKTLPSGSRPWKPLNPSLQCKICGKQLS----TNNSFKYHMQLHGTATP------------ 311

  Fly   509 AMNAAHAAAAAAAAAMIKMEMPLHPLHHQQMHHSQVPTTTVGVPVIKGDVASPTTKETVAWRYNL 573
                 :.......:...:.....|...|.:.:.::.||            .....::..:.|.:|
  Fly   312 -----YVCTICGESFKTRNARDGHVTLHDRNNPNRCPT------------CFKVYRQASSLRTHL 359

  Fly   574 DVSPVVEEMPPGSDVAYVCPTCGQMFSLHDRLAKHMASRHKSRNPANDIAKAYSCDVCRRSFARS 638
            .:...::        .:.|..||:..:......|||.: |....|       :.||:|.|.|..|
  Fly   360 LIHSGIK--------PFECSICGKRLTQKSGYKKHMLT-HTGEKP-------HGCDICGRRFRYS 408

  Fly   639 DMLTRHMRLHTGVKPYTCKVC-GQVFSRSDHLSTHQRTHTGEKPYKCPQCPYAACRRDMITRHMR 702
            ..|..|.|.|:..||:.|.|| .:.|..:..|:.|...|:.|:|:.|.||..:..||..:..|.:
  Fly   409 SNLIAHKRCHSQEKPHPCPVCQKRSFGSTSELNRHMLVHSSERPFGCEQCGKSFKRRISLAIHRQ 473

  Fly   703 THTRYDSRGGSREGREGREGREGKESRDSRRSNERIE 739
            :|         :.||:.|.. |.:........:|.:|
  Fly   474 SH---------KAGRQRRRA-EHEVGVQLEEQDENVE 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kluNP_001261690.1 FYDLN_acid <182..248 CDD:302856 12/58 (21%)
C2H2 Zn finger 592..613 CDD:275368 6/20 (30%)
COG5048 607..>687 CDD:227381 27/80 (34%)
zf-C2H2 626..648 CDD:278523 9/21 (43%)
C2H2 Zn finger 628..648 CDD:275368 9/19 (47%)
zf-H2C2_2 640..665 CDD:290200 10/25 (40%)
C2H2 Zn finger 656..676 CDD:275368 6/20 (30%)
zf-H2C2_2 668..690 CDD:290200 8/21 (38%)
C2H2 Zn finger 684..704 CDD:275368 6/19 (32%)
CG2712NP_570028.1 zf-AD 13..92 CDD:214871
C2H2 Zn finger 286..306 CDD:275368 4/23 (17%)
C2H2 Zn finger 314..334 CDD:275368 1/19 (5%)
C2H2 Zn finger 342..362 CDD:275368 4/31 (13%)
zf-H2C2_2 354..379 CDD:290200 5/32 (16%)
C2H2 Zn finger 370..390 CDD:275368 6/20 (30%)
COG5048 378..>463 CDD:227381 29/92 (32%)
zf-H2C2_2 384..407 CDD:290200 10/30 (33%)
C2H2 Zn finger 398..418 CDD:275368 9/19 (47%)
C2H2 Zn finger 426..447 CDD:275368 6/20 (30%)
zf-H2C2_2 439..464 CDD:290200 8/24 (33%)
C2H2 Zn finger 455..475 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24381
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.