DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klu and Zbtb5

DIOPT Version :9

Sequence 1:NP_001261690.1 Gene:klu / 39228 FlyBaseID:FBgn0013469 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001100127.1 Gene:Zbtb5 / 298084 RGDID:1307367 Length:670 Species:Rattus norvegicus


Alignment Length:561 Identity:115/561 - (20%)
Similarity:189/561 - (33%) Gaps:161/561 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 LELSHSDDNDQDDSPRISMS----PLQLQAAQSNLPQDQ-----NQPMNKENPLHVDIKTEIPSP 302
            |.:|...:..|:.|.|:..|    .|.|....|.|...|     :.||:.....::|.:|  |.|
  Rat   124 LPMSPPSERVQEQSARMQRSFMLQQLGLSIVSSALSSSQSGEEPSAPMSSSMRNNLDQRT--PFP 186

  Fly   303 YDRYFPIPSPLFGYYLHTKYLNEVFRRRHDLYPSPLQHTPSSIASET-ETSPNAQERKSSSNHVL 366
            ..|            ||.:......|.|..|..|   ...|:|:..| |:.|:...  |......
  Rat   187 MRR------------LHKRKQTVEERARQRLRSS---MDESAISDVTPESGPSGVH--SREEFFS 234

  Fly   367 PHALLANNSPPP----------------------SLPSPPRSESSVTNNVATTTTSSTTKKRSSP 409
            |.:|...::|.|                      ....|.:|:.|..|..:..|...|:.::.:.
  Rat   235 PDSLKIVDNPKPDGMADNQEDSAMMFDRPFGAQEDAQMPSQSDGSAGNMASRATQVETSFEQEAV 299

  Fly   410 KPKGK---------KGEKKPM-----------PPPQERPLDLCMRNE----VEPKKYKKSGSKSS 450
            ..||.         .|||:.|           |.||:...|:..:.|    ||.:....|..|..
  Rat   300 AEKGSFQCENPEVGLGEKEHMRVVVKSEPLSSPEPQDEVSDVTSQAEGSESVEVEGVVVSAEKID 364

  Fly   451 L--ESRSAGMMPPPPA---------LSAASSLESMSALSPAS--SSHSGHMPITSAATPNHQPPP 502
            |  ||.......|..:         |...::||..::.|.::  :...|....||.:|.::.|..
  Rat   365 LSPESSDRSFSDPQSSTDRVGDIHILEVTNNLEHKTSFSISNFLNKSRGSNFSTSQSTDDNLPNT 429

  Fly   503 NS--------PYANAMNAAHAAAAAAAAAMIKMEMPLHPLHHQQMHHSQVPTTTVGVPVIKGDVA 559
            .|        ||..:..|..|...::|... .:|.|..  .....|..:.....:|:|.::    
  Rat   430 TSDCRLEGEAPYLLSPEAGPAGGPSSAPGS-HVENPFS--EPADSHFVRPVQEVMGLPCVQ---- 487

  Fly   560 SPTTKETVAWRYNLD-----------VSPVVEEMPPG--SDVAY---VCPTCGQMFSLH-DRLAK 607
               |......::.:|           .|..:...|.|  |:..|   :.|....:.|:. .::::
  Rat   488 ---TSGYQGEQFGMDFPRSGLGLHSSFSRAMMGSPRGGASNFPYYRRIAPKMPVVTSVRSSQISE 549

  Fly   608 HMASRHKSRNPANDI--------------------------------------AKAYSCDVCRRS 634
            :.||.....|.|:..                                      |:.|:|.:|.::
  Rat   550 NQASSQLMMNGASSFENGHSSQPGPPQLTRASADVLSKCKKALSEHNVLVVEGARKYACKICCKT 614

  Fly   635 FARSDMLTRHMRLHTGVKPYTCKVCGQVFSRSDHLSTHQRT 675
            |.......:|:|:|||.|||.|..||:.||:|.||..|.:|
  Rat   615 FLTLTDCKKHIRVHTGEKPYACLKCGKRFSQSSHLYKHSKT 655

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity