DRSC/TRiP Functional Genomics Resources

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Protein Alignment klu and odd-2

DIOPT Version :9

Sequence 1:NP_001261690.1 Gene:klu / 39228 FlyBaseID:FBgn0013469 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_509032.1 Gene:odd-2 / 183219 WormBaseID:WBGene00003846 Length:254 Species:Caenorhabditis elegans


Alignment Length:130 Identity:44/130 - (33%)
Similarity:61/130 - (46%) Gaps:8/130 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   575 VSPVVEEMPPGSDVAYVCPTCGQMFSLHDRLAKHMASRHKSRNPANDIAKAYSCDVCRRSFARSD 639
            |||   :|.|....|.|.|     |..:|:....:..|.::...|....|.:.|..|.|.|.:|.
 Worm    81 VSP---KMSPTLTTAAVRP-----FVPYDQPWFMIPGRGRTTGRAARPKKEFICKYCDRHFTKSY 137

  Fly   640 MLTRHMRLHTGVKPYTCKVCGQVFSRSDHLSTHQRTHTGEKPYKCPQCPYAACRRDMITRHMRTH 704
            .|..|.|.||..:||:|.|||:.|.|.|||..|:..|..::|:||..|....|:...:..|..||
 Worm   138 NLLIHERTHTDERPYSCDVCGKAFRRQDHLRDHKYIHQKDRPFKCEICGKGFCQSRTLLVHRATH 202

  Fly   705  704
             Worm   203  202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kluNP_001261690.1 FYDLN_acid <182..248 CDD:302856
C2H2 Zn finger 592..613 CDD:275368 3/20 (15%)
COG5048 607..>687 CDD:227381 29/79 (37%)
zf-C2H2 626..648 CDD:278523 8/21 (38%)
C2H2 Zn finger 628..648 CDD:275368 8/19 (42%)
zf-H2C2_2 640..665 CDD:290200 12/24 (50%)
C2H2 Zn finger 656..676 CDD:275368 10/19 (53%)
zf-H2C2_2 668..690 CDD:290200 8/21 (38%)
C2H2 Zn finger 684..704 CDD:275368 4/19 (21%)
odd-2NP_509032.1 zf-C2H2 124..146 CDD:278523 8/21 (38%)
C2H2 Zn finger 126..146 CDD:275368 8/19 (42%)
zf-H2C2_2 138..163 CDD:290200 12/24 (50%)
C2H2 Zn finger 154..174 CDD:275368 10/19 (53%)
zf-H2C2_2 166..189 CDD:290200 8/22 (36%)
zf-C2H2 180..202 CDD:278523 5/21 (24%)
C2H2 Zn finger 182..202 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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