DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aps and PCD1

DIOPT Version :10

Sequence 1:NP_648421.1 Gene:Aps / 39226 FlyBaseID:FBgn0036111 Length:177 Species:Drosophila melanogaster
Sequence 2:NP_013252.1 Gene:PCD1 / 850844 SGDID:S000004141 Length:340 Species:Saccharomyces cerevisiae


Alignment Length:151 Identity:35/151 - (23%)
Similarity:58/151 - (38%) Gaps:37/151 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FRRRAACIC---VKSENEAEVLLVTSSRRPELW----IVPGGGVEPEEES-SVTAVREVLEEAGV 73
            |:|.:|.|.   :..:.|..|||...||....:    ..|||..:..:|: ...|.||..||.|:
Yeast    36 FKRNSAVIILLFIGMKGELRVLLTKRSRTLRSFSGDVSFPGGKADYFQETFESVARREAEEEIGL 100

  Fly    74 VGD---LGRCLG------VFENNDHMHRTEVFVMNVT-----QELDEWEDSRSI----------- 113
            ..|   |.:..|      |.:...::.||.:.|..:.     .:|::.||...:           
Yeast   101 PHDPEVLHKEFGMKLDNLVMDMPCYLSRTFLSVKPMVCFLYKDKLEKHEDKYKVPLDIRKFFGKL 165

  Fly   114 --GRKRQWFTIDDALSQLALH 132
              |.....|::  .|:.|.:|
Yeast   166 NPGETSSLFSV--PLNDLVIH 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApsNP_648421.1 NUDIX_DIPP2_like_Nudt4 19..143 CDD:467551 34/149 (23%)
PCD1NP_013252.1 NUDIX_CoAse_Nudt7 38..211 CDD:467532 34/149 (23%)

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