DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr67Fa2 and Lcp65Ag3

DIOPT Version :9

Sequence 1:NP_648419.1 Gene:Cpr67Fa2 / 39224 FlyBaseID:FBgn0036109 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_652662.1 Gene:Lcp65Ag3 / 59159 FlyBaseID:FBgn0086611 Length:105 Species:Drosophila melanogaster


Alignment Length:106 Identity:36/106 - (33%)
Similarity:61/106 - (57%) Gaps:12/106 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RYMLVASAVLACAYGAATYNQEAGAYITKIGSDIQPEGNYNYQYETSNGIAAQESG----IGGNH 63
            ::::|..|:.|.|..|....:..   |.:..||:.|| ::.|.:|||:|.|||..|    ||..:
  Fly     2 KFLIVFVALFAVALAAPAAEEPT---IVRSESDVGPE-SFKYDWETSDGQAAQAVGQLNDIGTEN 62

  Fly    64 ----ANGGFSWYSPEGELVQISYVADENGYQPQGALLPTPP 100
                .:|.:.:.:.:|:..|::|:||:||:||:||.||..|
  Fly    63 EAISVSGSYRFIADDGQTYQVNYIADKNGFQPEGAHLPVAP 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr67Fa2NP_648419.1 Chitin_bind_4 42..89 CDD:278791 18/54 (33%)
Lcp65Ag3NP_652662.1 Chitin_bind_4 37..92 CDD:278791 18/54 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2EQ63
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.