DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6409 and SWC3

DIOPT Version :9

Sequence 1:NP_001287023.1 Gene:CG6409 / 39220 FlyBaseID:FBgn0036106 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_009391.2 Gene:SWC3 / 851222 SGDID:S000000009 Length:625 Species:Saccharomyces cerevisiae


Alignment Length:245 Identity:52/245 - (21%)
Similarity:99/245 - (40%) Gaps:38/245 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 DDAVPQKEEVKQAPEDHDAKKEKREAHHEEGHQDHEAPHKEEVKQAPEAHDAKREKREAHHEEGH 179
            :|.:.||.:     ::.:.||:::|...:...:......:|..:|..:...||.:|.:...|   
Yeast   176 NDKIEQKWQ-----DEQELKKKEKELKRKNDAEAKRLRMEERKRQQMQKKIAKEQKLQLQKE--- 232

  Fly   180 HGDDAAPHK--EEVKQAPETHEDKKEKREAHHEEGHKDEAGDRPQ-VEDLSLPHALPAVAHTAEL 241
               :.|..|  :|..:.....|.||.|.:..:::|....:...|: :.:|:|        ...|.
Yeast   233 ---NKAKQKLEQEALKLKRKEEMKKLKEQNKNKQGSPSSSMHDPRMIMNLNL--------MAQED 286

  Fly   242 PKKQEKRETVEKPDSVKARESLQHNPQRSQELHKAIESLAGGKAPEQRHQRDIPVPTQTKATTTT 306
            ||.....|||.|        .|.:|.| .:|..|.||      ..::|...:.||..:...|||.
Yeast   287 PKLNTLMETVAK--------GLANNSQ-LEEFKKFIE------IAKKRSLEENPVNKRPSVTTTR 336

  Fly   307 DLPSTTKSELESTTPSIHNLHIPHPIPVAELFEKNKHADKSTSSSEESKE 356
            ..| .:|::..:....::::.:......|....:.|.||...:..::|||
Yeast   337 PAP-PSKAKDVAEDHRLNSITLVKSSKTAATEPEPKKADDENAEKQQSKE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6409NP_001287023.1 PTZ00121 <60..>289 CDD:173412 37/176 (21%)
SWC3NP_009391.2 PTZ00108 <211..439 CDD:240271 46/205 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28PYK
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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