DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6418 and rhlE

DIOPT Version :10

Sequence 1:NP_648413.1 Gene:CG6418 / 39218 FlyBaseID:FBgn0036104 Length:791 Species:Drosophila melanogaster
Sequence 2:NP_415318.1 Gene:rhlE / 945425 ECOCYCID:EG11235 Length:454 Species:Escherichia coli


Alignment Length:471 Identity:162/471 - (34%)
Similarity:245/471 - (52%) Gaps:40/471 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 SFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQ 334
            ||...|....:::||.:..|.:|||||.||:|..|.|||::..|:||:||||.|..|:|.|::.:
E. coli     2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITR 66

  Fly   335 KQLKPGDGPI-GLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVA 398
            :....|..|: .|||.|||||:.||....:.:.|..|:..:..:||.|...|...|..|.:::||
E. coli    67 QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVA 131

  Fly   399 TPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIER 463
            ||||::|:....|..|.:|..|||||||||..|||...:|.:...:...||.|:|||||...|:.
E. coli   132 TPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKA 196

  Fly   464 LARDVLSDPVRIVQGDLNEANQDITQSVYVFPNPLQKWNWLLCHLVKFLSEGSVLIFVTKKVDAE 528
            ||..:|.:|:.|.....|.|:..:||.|: |.:..:| ..||.|::...:...||:|...|..|.
E. coli   197 LAEKLLHNPLEIEVARRNTASDQVTQHVH-FVDKKRK-RELLSHMIGKGNWQQVLVFTRTKHGAN 259

  Fly   529 TVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTAR 593
            .::..|.........:||:..|..|.:.:..||..:..:|||||:|||||||..:.:||||:...
E. coli   260 HLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPN 324

  Fly   594 DIETHTHRIGRTGRAGEKGNAYTLV-TDKDKEFAGHLVRNLEGADQLVPDDLMELAM----KSSW 653
            ..|.:.|||||||||...|.|.:|| .|:.|     |:|::|   :|:..::..:|:    ....
E. coli   325 VPEDYVHRIGRTGRAAATGEALSLVCVDEHK-----LLRDIE---KLLKKEIPRIAIPGYEPDPS 381

  Fly   654 FRSSRFKQGKGKRPTNTHTGLGYREKGNGGGGYGSAGG--------SESTASVSAHSPSDGPSSK 710
            .::...:.|:.:|               ||||.|..||        .|..|..::..|::.| |:
E. coli   382 IKAEPIQNGRQQR---------------GGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKP-SR 430

  Fly   711 AFSSSGPATDRYTAMR 726
            ....:.||.::....|
E. coli   431 RLGDAKPAGEQQRRRR 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6418NP_648413.1 SrmB 269..634 CDD:440279 142/365 (39%)
rhlENP_415318.1 PRK10590 1..454 CDD:236722 162/471 (34%)

Return to query results.
Submit another query.