DRSC/TRiP Functional Genomics Resources

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Protein Alignment tna and Pias3

DIOPT Version :9

Sequence 1:NP_001368945.1 Gene:tna / 39217 FlyBaseID:FBgn0026160 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_113972.2 Gene:Pias3 / 83614 RGDID:708413 Length:628 Species:Rattus norvegicus


Alignment Length:579 Identity:133/579 - (22%)
Similarity:199/579 - (34%) Gaps:144/579 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   575 HSPVPGNPTPPLTPACSVPY-------VSPNPDIKPPMDNSEEMRLTFPVRDGIILAPFRLLHNL 632
            |.|:| .|..|......:|:       :.|...........||...||      .|.|.:|...|
  Rat   116 HPPLP-QPVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTF------ALTPQQLQQIL 173

  Fly   633 SVSNHVFHLKQNVYNTLMCRNDLELQLK-CFHQDDRQMNTNWPHTVTVSAN-------------- 682
            :        .:.|.....|...:::||: |..:........:|..:.|..|              
  Rat   174 T--------SREVLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTK 230

  Fly   683 --------ATPLNI-ERSEKNSTALRPLYLKAVCQPGRNTLQLTASSCCCSHLFVLQLVHRPSVR 738
                    :.|:|| ..:..::|....:.:....:.|||            :...:.||.:.:..
  Rat   231 NGAEPKRPSRPINITPLARLSATVPNTIVVNWSSEFGRN------------YSLSVYLVRQLTAG 283

  Fly   739 QVLQTLHKRNLLPLEHSVQKIKRNLSQPEANAGPD---ATPQQQQQQGGGQQCAKISLKCPITKS 800
            .:||.|..:.:...:||...||..|:     |.||   ||..           .::||.||:.|.
  Rat   284 TLLQKLRAKGIRNPDHSRALIKEKLT-----ADPDSEVATTS-----------LRVSLMCPLGKM 332

  Fly   801 RIRLPARGHECKHVQCFDLEAYLMINSERGSWRCPECSKSAITDTLEIDQYIWAILNTLGNSDVD 865
            |:.:|.|...|.|:|.||...||.:|.::.:|.||.|.|.|..::|.||.....|||:.  ||.|
  Rat   333 RLTVPCRALTCAHLQSFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILNSC--SDCD 395

  Fly   866 EVIIDSSANWRALQHNGGMPNAPPPSNVPSNPSGGSGSNSGNGSVNPTLPVIKQELCDDIAKVMS 930
            |:......:|..::.........||.....:....|....||.|.|.     |:....|:....|
  Rat   396 EIQFMEDGSWCPMKPKKEASEVCPPPGYGLDGLQYSPVQEGNQSENK-----KRVEVIDLTIESS 455

  Fly   931 PGSTQLPTWDSAQAMSPYNMH-DMNSIASGNMMGN-GGNTNQHGN----RSSYDGFSGNHSDGSG 989
            .....||         |...| .:.|.|...:.|: |..|:.|..    ||...|..|  ||...
  Rat   456 SDEEDLP---------PTKKHCPVTSAAIPALPGSKGALTSGHQPSSVLRSPAMGTLG--SDFLS 509

  Fly   990 GLP----------GGDGGVNSLDQLNAME-----------KSLSDQ--MPHTPHTPGAASHPMTP 1031
            .||          |.|  :..||..:.::           .||.:|  :.|.....|...|.:  
  Rat   510 SLPLHEYPPAFPLGAD--IQGLDLFSFLQTESQHYSPSVITSLDEQDTLGHFFQFRGTPPHFL-- 570

  Fly  1032 GGP--PSVSSSHNE----PISGGTPNANGSGSATNGSGNNNSSTGHNSPQTPGTPSRMG 1084
             ||  |::.|||..    |..|...:....||:..        .||..| .|..||..|
  Rat   571 -GPLAPTLGSSHRSATPAPAPGRVSSIVAPGSSLR--------EGHGGP-LPSGPSLTG 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnaNP_001368945.1 Med15 216..>604 CDD:312941 7/35 (20%)
SP-RING_ZMIZ 792..839 CDD:319705 20/46 (43%)
Pias3NP_113972.2 Interaction with CCAR2. /evidence=ECO:0000250|UniProtKB:Q9Y6X2 1..200 20/98 (20%)
SAP 11..>36 CDD:128789
LXXLL motif 19..23
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..95
PINIT 126..263 CDD:291022 22/150 (15%)
zf-MIZ 323..371 CDD:280964 20/47 (43%)
SUMO1-binding. /evidence=ECO:0000250 450..460 1/9 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 573..618 14/53 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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