DRSC/TRiP Functional Genomics Resources

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Protein Alignment tna and zmiz1a

DIOPT Version :9

Sequence 1:NP_001368945.1 Gene:tna / 39217 FlyBaseID:FBgn0026160 Length:1186 Species:Drosophila melanogaster
Sequence 2:XP_005156910.1 Gene:zmiz1a / 561061 ZFINID:ZDB-GENE-080220-27 Length:1080 Species:Danio rerio


Alignment Length:1192 Identity:396/1192 - (33%)
Similarity:509/1192 - (42%) Gaps:374/1192 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GKKNDEMNQQAGSSRAPATGGQISP--PGATTVGVEQQQHLQQQHQQQYYNQQQQQQQQQYQQQH 134
            |..|...:|..|:..|...    :|  ||...:|.....:....:..|:..||||...:....| 
Zfish   184 GVTNTSQSQVLGNPMANTN----NPMNPGGNALGSGMSANNPGINSPQFPGQQQQFSTKGGSNQ- 243

  Fly   135 QRDNFLAYQQQQQQQQQQQQQLQRSGGGG--GNFMLGNDLVGGDSLRSLNNTFGPNSEFTSLGGA 197
                  ||.||....:.     ...||||  |::..|.:...|..:.....   |.|:||.  .|
Zfish   244 ------AYMQQSMYGRP-----GHPGGGGFAGSYPGGPNAPSGMGMPPHTR---PPSDFTQ--PA 292

  Fly   198 NSSASSSLSGLSSSSSQGYTGMVAASQQHQQQQPHHHQQQQQQQQQQHMGSMDAMGGYSQMGGGM 262
            .::|:::::..:::::...|..|||.|:..:.                      |..|:|:....
Zfish   293 AAAAAAAVAAAAATATATATATVAALQETNKD----------------------MNQYNQVCSSF 335

  Fly   263 HPGPNSGMMGNMNGQYMN--GGSG----QGGYNGAQGMGMGYGGGGSMGPQRHHQMTPMNQMQNM 321
            ..||..|    .|.|:||  |..|    .||.|.| .||.|.......||       ||.  .|.
Zfish   336 QMGPTQG----YNSQFMNQPGPRGPPSMAGGMNPA-AMGGGMNSSNMSGP-------PMG--MNQ 386

  Fly   322 SMGPGVGGSGGMGGGMNPLQQQAAQQQMGGMNPMAKMQGMANGGYPQQAPPSLTQQQQQQQQRRM 386
            ..|||:|..||.|                        |.|...|||...|.|:..|         
Zfish   387 PRGPGMGPFGGHG------------------------QRMPQQGYPGPRPQSMPMQ--------- 418

  Fly   387 APYPHPQMHMAQKRAAAGVGGAGGMYPGNPMQQQQAQMYGNQQMHPGSGGGVPLPMQAGGAGNGY 451
                                |....|||.|       .||.||                     :
Zfish   419 --------------------GTKRPYPGEP-------NYGGQQ---------------------F 435

  Fly   452 GRSGPMGVGNGGYGRMSAGNGMGPTGGPVMGPMGPGGMTAGGMGPGPGCMSQQRFMPQGSGGGMP 516
            |.:|......|.|...:|..       |:..|..||                ||...|.|.|..|
Zfish   436 GPNGQFPNQQGQYPNPNASR-------PLPSPNYPG----------------QRMPGQQSTGQYP 477

  Fly   517 GVGYGGVGGAASHQGQFY---PGSGQSAGMQQAGGMCPAGPGAVATTGNPYQNQGFQQNYQHSPV 578
            ..|.        ..||:|   |.:||:...  :||    |.|.....|.|.|    ..||.||||
Zfish   478 PTGV--------PMGQYYKQEPFNGQNNNF--SGG----GYGYSQGNGPPRQ----VVNYPHSPV 524

  Fly   579 PGNPTPPLTPACSV-PYVSPNPDIKPPM----------------DNSEEMRLTFPVRDGIILAPF 626
            |||||||:||..|: ||:||:.|:|||.                :.:||:|||||||||::|.||
Zfish   525 PGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDMKPNMTSLPPPPNNPNEELRLTFPVRDGVVLEPF 589

  Fly   627 RLLHNLSVSNHVFHLKQNVYNTLMCRNDLELQLKCFHQDDRQMNTNWPHTVTVSANATPLNIERS 691
            ||.|||:||||||||:.:|:.|||.|:|||||.||:|.:|||||||||.:|.||.|||||.|||.
Zfish   590 RLEHNLAVSNHVFHLRPSVHQTLMWRSDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERG 654

  Fly   692 EKNSTALRPLYLKAVCQPGRNTLQLTASSCCCSHLFVLQLVHRPSVRQVLQTLHKRNLLPLEHSV 756
            : |.|:.:||:||.||||||||:|:|.::||||||||||||||||||.|||.|.|:.|||.||.:
Zfish   655 D-NKTSHKPLHLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCI 718

  Fly   757 QKIKRNLSQPEANAGPDATPQQQQQQGGGQQCAKISLKCPITKSRIRLPARGHECKHVQCFDLEA 821
            .|||||.|...|:.| :||  ...:.|..|...|:|||||||..||:||||||:||||||||||:
Zfish   719 TKIKRNFSSVAASTG-NAT--LNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLES 780

  Fly   822 YLMINSERGSWRCPECSKSAITDTLEIDQYIWAILNTLGNSDVDEVIIDSSANWRALQHNGGMPN 886
            ||.:|.|||:||||.|:|:|:.:.||:|||:|.|||.:.||:.:||.||.:.:||          
Zfish   781 YLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQNSEFEEVNIDPTCSWR---------- 835

  Fly   887 APPP----SNVPSNPSGGSGSNSGNGSVNPTLPVIKQELCDDIAKVMSPGSTQLPTWDSAQAM-- 945
             |.|    .::..:|.|               |:.|:      .|.|||....:|......|.  
Zfish   836 -PVPIKSDIHIKEDPDG---------------PLAKR------FKTMSPSQMIMPNVMDMIAQLG 878

  Fly   946 ---SPYN----MHDMNSIASGNMMGNGGNTNQHGNRSSYDG---FSGNHSDGSGGLPGGD----- 995
               |||.    .|.          ||.|.....|..:||.|   |...||:..||.|..|     
Zfish   879 PGPSPYTPLPPQHG----------GNNGEYGGQGRGNSYQGHGNFDFPHSNSGGGAPMNDFMHGP 933

  Fly   996 ------GGVNSL---DQLNAMEKSLSDQMPH-----------------TPHTPGAASHPMTPGGP 1034
                  ...|||   |:  .:...:.|.|||                 :||....::.|:...||
Zfish   934 QLSHPPDVPNSLMGPDK--PLAHGMPDTMPHPVSADQSHASMQPGMHASPHPNSQSAQPLHHSGP 996

  Fly  1035 PSVSSSHNEPISGGTPNANGSGSATNGSGNNNSSTGHNSPQTPGTPSRMGGGMGGSGSADSQQQQ 1099
            || |....:|.|...|:.|                .|..|.....|| ..|..||.|.||..:. 
Zfish   997 PS-SQPPRQPPSQQQPSQN----------------THPHPDMSFNPS-ADGQPGGQGPADMPEP- 1042

  Fly  1100 QEQLLNSLMSSQTQLKFSESDLSAELQSFDAAAAAINDTAHDLNLLQDVDPMEILSYLDPQPDLN 1164
                  ||            ||..||                      .:|.|:|||||| ||| 
Zfish  1043 ------SL------------DLLPEL----------------------ANPDELLSYLDP-PDL- 1065

  Fly  1165 TPPSSGSSNNNASDDLLATLFD 1186
              |||      ::|||| :||:
Zfish  1066 --PSS------SNDDLL-SLFE 1078

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnaNP_001368945.1 Med15 216..>604 CDD:312941 104/397 (26%)
SP-RING_ZMIZ 792..839 CDD:319705 36/46 (78%)
zmiz1aXP_005156910.1 CITED 336..>463 CDD:282356 52/228 (23%)
zf-MIZ 750..798 CDD:280964 36/47 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580723
Domainoid 1 1.000 311 1.000 Domainoid score I1288
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 457 1.000 Inparanoid score I1555
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143293at33208
OrthoFinder 1 1.000 - - FOG0002880
OrthoInspector 1 1.000 - - otm25499
orthoMCL 1 0.900 - - OOG6_105005
Panther 1 1.100 - - O PTHR10782
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3884
SonicParanoid 1 1.000 - - X2238
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.980

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