DRSC/TRiP Functional Genomics Resources

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Protein Alignment tna and pias4a

DIOPT Version :10

Sequence 1:NP_001368945.1 Gene:tna / 39217 FlyBaseID:FBgn0026160 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_998568.2 Gene:pias4a / 406712 ZFINID:ZDB-GENE-040426-2734 Length:505 Species:Danio rerio


Alignment Length:502 Identity:106/502 - (21%)
Similarity:166/502 - (33%) Gaps:159/502 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   534 YPGSGQSAGMQQAGGMCPAGPGAVATTGNPYQNQGFQQNYQHSPVPGNPTPPLTPACSVPYVSPN 598
            ||....|          |.|.|    .|..|.|             |.|.|...||..|..| |.
Zfish    85 YPALNSS----------PRGTG----QGTDYLN-------------GIPKPAPPPAAEVKLV-PL 121

  Fly   599 P------DIKPPMD----NSEEMRLTFPVRDGIILAPFRLLHNLSVSNHVFHLKQNVYNTLMCRN 653
            |      .:.||.:    |||:                     |..|..||.|..|..:.:  ||
Zfish   122 PFYHNLETLLPPTELVAQNSEK---------------------LQESQCVFDLTPNQVDQI--RN 163

  Fly   654 DLELQ--LK--------CFHQDDRQMNTNWPHTVTVSANATPLNIE-RSEKNSTALRPLYLKAVC 707
            ..||:  :|        |:..........:|..:.|..|.:..::. ....|...:.|   :..|
Zfish   164 SSELRPGMKSVQVVLRICYTDSIGVQEDQYPPNIAVKVNQSYCHVPGYYPSNKPGVEP---RRPC 225

  Fly   708 QPGR-----------NTLQLTASSCCCSHLFVLQLVHRPSVRQVLQTLHKRNLLPLEHSVQKIKR 761
            :|..           |.:.:|..:....:...:.||...:..::...|...::...:...::|:.
Zfish   226 RPVNITPWLHLSTVTNRVTITWGNFGKRYSVAVYLVRVFTSGELFNQLKHCSVENPDRCRERIQD 290

  Fly   762 NLS-QPEANAGPDATPQQQQQQGGGQQCAKISLKCPITKSRIRLPARGHECKHVQCFDLEAYLMI 825
            .|. .||:......              .::||.||:.|.|:.:|.|...|.|:||||...:|.:
Zfish   291 KLRFDPESEIATTG--------------LRVSLICPLVKMRLGVPCRVLTCAHLQCFDAVFFLQM 341

  Fly   826 NSERGSWRCPECSKSAITDTLEIDQYIWAILNTLGNSDVDEVIIDSSANWRALQHNGGMPNAPPP 890
            |.::.:|.||.|.|.|..:.|.||..:..||... ..||:|:...:..:||.::.:         
Zfish   342 NEKKPTWTCPVCDKPAPFELLTIDGLLSEILKET-PEDVEEIEYLTDGSWRPIRDD--------- 396

  Fly   891 SNVPSNPSGGSGSNSGNGSVNPTLPVIKQELCDDIAKVMSPGSTQLPTWDSAQAMSPYNMHDMNS 955
                     .........|..|..||:  ::|             :|.                 
Zfish   397 ---------KEKERERENSRTPDYPVV--DIC-------------VPE----------------- 420

  Fly   956 IASGNMMGNGGNTNQHGNRSSYDGFSGNHSDGSGGLPGGDGGVNSLD 1002
             |:|:...:.| |||.|...     ||..|.|:|...||.||...:|
Zfish   421 -ANGHSPAHSG-TNQTGKSG-----SGGASAGTGSTSGGSGGGTVVD 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnaNP_001368945.1 Med15 216..>604 CDD:312941 18/75 (24%)
SP-RING_ZMIZ 792..839 CDD:438445 20/46 (43%)
pias4aNP_998568.2 SAP 12..46 CDD:128789
LXXLL motif. /evidence=ECO:0000250|UniProtKB:Q8N2W9 20..24
PINIT 119..262 CDD:464136 30/169 (18%)
SP-RING_PIAS4 303..360 CDD:438470 22/70 (31%)
Required for nuclear localization. /evidence=ECO:0000269|PubMed:22345667 374..505 28/145 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..505 23/123 (19%)
Blue background indicates that the domain is not in the aligned region.

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