DRSC/TRiP Functional Genomics Resources

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Protein Alignment tna and pias4b

DIOPT Version :10

Sequence 1:NP_001368945.1 Gene:tna / 39217 FlyBaseID:FBgn0026160 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_956637.2 Gene:pias4b / 393314 ZFINID:ZDB-GENE-040426-1298 Length:485 Species:Danio rerio


Alignment Length:331 Identity:84/331 - (25%)
Similarity:136/331 - (41%) Gaps:49/331 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   595 VSPNPDIKPPMDNSEEMRLTFPVRDGIILAPFRLLHN----LSVSNHVFHLKQN----VYNTLMC 651
            :||.....|.....:.::|.|......|:.|..|:..    :..|:.:|||.::    :.|:   
Zfish   114 LSPGGTPSPKSAGPQMIKLPFYQMLETIIPPTPLVPTYGGAMQNSDFLFHLSESQQALIQNS--- 175

  Fly   652 RNDLELQLK---CFHQDDRQMNTNWPHTVTVSANATPLNIERS-EKNSTALRPLYLKAVCQPGRN 712
            |:...:|:.   |:.:........:|..:.||.|.....::.: ..|...|.|   ...|:|...
Zfish   176 RSSQPVQVVLRICYSESIGVEEDQYPPNICVSVNHNNCPVQCTYSSNKLGLEP---SRPCRPIDI 237

  Fly   713 TLQLTAS----------SCCCSHLFVLQLVHRPSVRQVLQTLHKRNLLPLEHSVQKIKRNL-SQP 766
            |..|..|          :...|:...:.||...|.:|:|..|...::...:....::...| |.|
Zfish   238 TSDLYLSFTNRFTVLWGNFGKSYSVAVYLVRLVSCQQLLDQLRSSSVEQQDVCRLRVSEKLRSDP 302

  Fly   767 EANAGPDATPQQQQQQGGGQQCAKISLKCPITKSRIRLPARGHECKHVQCFDLEAYLMINSERGS 831
            |...   ||...|           :||.||:.|.|:.:|.|...|.|:||||...||.:|.::..
Zfish   303 ETEV---ATTGLQ-----------VSLICPLVKLRMSVPCRSRGCAHLQCFDASFYLQMNEKKPR 353

  Fly   832 WRCPECSKSAITDTLEIDQYIWAILNTLGNSDVDEVIIDSSANWRALQH-----NGGMPNAPPPS 891
            |.||.|.:.|..|.|.||..:..:|.:.| .||:|:...|.:.|:|::|     |.|....|...
Zfish   354 WSCPVCHRYAPFDELRIDSLLRDVLESSG-EDVEEIKYLSDSTWKAVKHDKSNQNKGSALHPVKH 417

  Fly   892 NVPSNP 897
            ||.|.|
Zfish   418 NVNSKP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnaNP_001368945.1 Med15 216..>604 CDD:312941 2/8 (25%)
SP-RING_ZMIZ 792..839 CDD:438445 21/46 (46%)
pias4bNP_956637.2 SAP 42..76 CDD:128789
PINIT 131..268 CDD:464136 27/142 (19%)
RING_Ubox 309..366 CDD:473075 23/67 (34%)
Blue background indicates that the domain is not in the aligned region.

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