DRSC/TRiP Functional Genomics Resources

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Protein Alignment tna and Pias4

DIOPT Version :10

Sequence 1:NP_001368945.1 Gene:tna / 39217 FlyBaseID:FBgn0026160 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_001094227.1 Gene:Pias4 / 362827 RGDID:1308737 Length:507 Species:Rattus norvegicus


Alignment Length:506 Identity:112/506 - (22%)
Similarity:185/506 - (36%) Gaps:141/506 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   564 YQNQGFQQNYQHSPVPGNPTPPLT-----------PACSVP-----YVS-----PNPDIKPPMDN 607
            |:.:..:::.:..|....|..||.           |....|     |::     |...:||    
  Rat    62 YETRYAKKSAEPGPQAPRPLDPLALHSMPRTPLSGPTVDYPVLYGKYLNGLGRLPTKALKP---- 122

  Fly   608 SEEMRLT----FPVRDGIILAPFRLL----HNLSVSNHVFHLKQNVYNTLMCRNDLELQ------ 658
              |:||.    |.:.|. :|.|..|:    ..|..|..:|.|...  ...|.||..|||      
  Rat   123 --EVRLVKLPFFNMLDE-LLKPTELVPQSAEKLQESPCIFALTPR--QVEMIRNSRELQPGVKAV 182

  Fly   659 ---LK-CFHQDDRQMNTNWPHTVTVSANATPLNIE-RSEKNSTALRPLYLKAVCQP--------- 709
               |: |:..........:|..:.|..|.:..::. ....|...:.|   |..|:|         
  Rat   183 QVVLRICYSDTSCPQEDQYPPNIAVKVNHSYCSVPGYYPSNKPGVEP---KRPCRPINLTHLMYL 244

  Fly   710 --GRNTLQLTASSCCCSHLFVLQLVHRPSVRQVLQTLHKRNLLPLEHSVQKIKRNLSQPEANAGP 772
              ..|.:.:|..:...|:...|.||.:.:...:||.|   ..:.::|  .::.:.|.:.:....|
  Rat   245 SSATNRITVTWGNYGKSYSVALYLVRQLTSSDLLQRL---KTIGVKH--PELCKALVKEKLRLDP 304

  Fly   773 DATPQQQQQQGGGQQCAKISLKCPITKSRIRLPARGHECKHVQCFDLEAYLMINSERGSWRCPEC 837
            |:   :....|     .::||.||:.|.|:.:|.|...|.|:||||...||.:|.::.:|.||.|
  Rat   305 DS---EIATTG-----VRVSLICPLVKMRLSVPCRAETCAHLQCFDAVFYLQMNEKKPTWMCPVC 361

  Fly   838 SKSAITDTLEIDQYIWAILNTLGNSDVDEVIIDSSANWRALQHNGGMPNAPPPSNVPSNPSGGSG 902
            .|.|..|.|.||..:..||:..  .|.||:...:..:||.::..      ..||..|..|....|
  Rat   362 DKPAAYDQLIIDGLLSKILSEC--EDADEIEFLAEGSWRPIRAE------KEPSCSPQGPILVLG 418

  Fly   903 SNSGNGSVNPTLPVIKQELCDDIAKVMSPGSTQLPTWDSAQAMSPYNMHDMNSIASGNMMGNGGN 967
            ::..||                    ::|.|:           :|       .:.|| :.|.|| 
  Rat   419 TSDANG--------------------LAPASS-----------TP-------GMGSG-LSGPGG- 443

  Fly   968 TNQHGNRSSYDGFSGNHSDGSGGLPGGDGGVN----SLDQLNAMEKSLSDQ 1014
                         :|..:..:|||..|..|.:    :||..::.|....|:
  Rat   444 -------------AGGGAGAAGGLENGKTGADVVDLTLDSSSSSEDEDEDE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnaNP_001368945.1 Med15 216..>604 CDD:312941 10/60 (17%)
SP-RING_ZMIZ 792..839 CDD:438445 21/46 (46%)
Pias4NP_001094227.1 SAP 12..46 CDD:128789
PINIT 127..270 CDD:464136 30/148 (20%)
SP-RING_PIAS4 311..368 CDD:438470 24/61 (39%)
Blue background indicates that the domain is not in the aligned region.

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