DRSC/TRiP Functional Genomics Resources

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Protein Alignment tna and Su(var)2-10

DIOPT Version :10

Sequence 1:NP_001368945.1 Gene:tna / 39217 FlyBaseID:FBgn0026160 Length:1186 Species:Drosophila melanogaster
Sequence 2:NP_724749.1 Gene:Su(var)2-10 / 35927 FlyBaseID:FBgn0003612 Length:640 Species:Drosophila melanogaster


Alignment Length:669 Identity:143/669 - (21%)
Similarity:221/669 - (33%) Gaps:228/669 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   536 GSGQSAGMQQAGGMCPAGPGAVATTGNPYQNQGFQQNYQHSPVPGNPTPPLTPACSVPYVSPNPD 600
            ||||  |:|..||......||      |:.       :.||.   |...|:           :||
  Fly   136 GSGQ--GVQVPGGQMNVVGGA------PFL-------HTHSI---NSQLPI-----------HPD 171

  Fly   601 IKPPMDNSEEMRLTFPVRDGIILAPFRLL--HNLSVSNHVFHL------------KQNVYNTLMC 651
            ::       ..:|.|....|.::.|..|:  :...|....|:.            .:::.|:...
  Fly   172 VR-------LKKLAFYDVLGTLIKPSTLVPRNTQRVQEVPFYFTLTPQQATEIASNRDIRNSSKV 229

  Fly   652 RNDLELQLK-CFHQDDRQMNTNWPHTVTVSAN----------------------ATPLNIERSEK 693
            .:.:::||: |..:........:|..|.|..|                      ..|:|:..:.|
  Fly   230 EHAIQVQLRFCLVETSCDQEDCFPPNVNVKVNNKLCQLPNVIPTNRPNVEPKRPPRPVNVTSNVK 294

  Fly   694 NSTALRPLYLKAVCQPGRNTLQLTASSC---CCSHLFVLQLVHRPSVRQVLQTLHKRNLLPLEHS 755
            .|..:              |..:|...|   ..|:...:.||.:.:..|:||.:..:.:.|.:::
  Fly   295 LSPTV--------------TNTITVQWCPDYTRSYCLAVYLVKKLTSTQLLQRMKTKGVKPADYT 345

  Fly   756 VQKIKRNLSQPEANAGPDATPQQQQQQGGGQQCAKISLKCPITKSRIRLPARGHECKHVQCFDLE 820
            ...||..|:: :|:.....|            ..|:||.||:.|.::.||.|...|.|:||||..
  Fly   346 RGLIKEKLTE-DADCEIATT------------MLKVSLNCPLGKMKMLLPCRASTCSHLQCFDAS 397

  Fly   821 AYLMINSERGSWRCPECSKSAITDTLEIDQYIWAIL-NTLGNSDVDEVIIDSSANWRALQHNGGM 884
            .||.:|..:.:|.||.|.|.||.|.|.||.|...:| ::|..||..|:.:....:|    ...|:
  Fly   398 LYLQMNERKPTWNCPVCDKPAIYDNLVIDGYFQEVLGSSLLKSDDTEIQLHQDGSW----STPGL 458

  Fly   885 PNAPPPSNVPSNPSGGSGSNSGNGSVNPTLPVIKQ--ELCDDIAKV----MSPGSTQLPTWDSAQ 943
            .:.....:.||.|:             ..:.||..  ||..|.||.    :||...:.||..|..
  Fly   459 RSETQILDTPSKPA-------------QKVEVISDDIELISDDAKPVKRDLSPAQDEQPTSTSNS 510

  Fly   944 AMSPYNMHDMNSIASGNMMGNGGNTNQHGNRSSYDGFSGNHSDGSGGLPGGDGGVNSLDQLNAME 1008
            ......:.|                                ||                      
  Fly   511 ETVDLTLSD--------------------------------SD---------------------- 521

  Fly  1009 KSLSDQMPHTPHTPGAASHPMTPGGPPSVSSSHNEPISGGTPNANGSGSATNGSGNNNSSTGHNS 1073
                |.||.....|.|..         :|:||          .:||||      |...:.|....
  Fly   522 ----DDMPLAKRRPPAKQ---------AVASS----------TSNGSG------GGQRAYTPAQQ 557

  Fly  1074 PQTPGTPSRMGGGMGGSGSADSQQQQQEQ-------------LLNSLMSSQTQLK-FSESDLSAE 1124
            ||...:|.:............|:||.|:|             ||.||.::....| |...||:| 
  Fly   558 PQQSESPEQQASRQSPEKQTVSEQQLQQQQHEQPATAAVHASLLESLAAAVADQKHFQLLDLAA- 621

  Fly  1125 LQSFDAAAAAINDTAHDLN 1143
               ..|||||...:....|
  Fly   622 ---VAAAAAATASSGQSQN 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnaNP_001368945.1 Med15 216..>604 CDD:312941 17/67 (25%)
SP-RING_ZMIZ 792..839 CDD:438445 21/46 (46%)
Su(var)2-10NP_724749.1 SAP 49..83 CDD:128789
PINIT 175..323 CDD:464136 24/161 (15%)
SP-RING_PIAS 369..416 CDD:438444 21/46 (46%)
Blue background indicates that the domain is not in the aligned region.

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